1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTAAAGACGAAGGAAGCCGAACGTTCACCATGAGAGAATTGCTGAACGGATTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAGgttatagctctttttcctaactgaatcaagaaaatgaaaaacgacaatgcgttcaatttttcttgttgatgcaactacggaacagtagaacacaaaaatt...
species | Glycine max |
transcript | GLYMA20G35990.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAG CCCAGAACAACAGCAACAGCAGGCAGACCAGAACAACGCTGCAATGGATTTEST: gi|19935390|gb|BQ080420.1|BQ080420
genomic: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAGgttatagctc ... aaattttcagCCCAGAACAACAGCAACAGCAGGCAGACCAGAACAACGCTGCAATGGATTT
EST: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAG CCCAGAACAACAGCAACAGCAGGCAGACCAGAACAACGCTGCAAEST: gi|298192905|gb|HO033339.1|HO033339
genomic: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAGgttatagctc ... aaattttcagCCCAGAACAACAGCAACAGCAGGCAGACCAGAACAACGCTGCAA
EST: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAG CCCAGAACAACAGCAACAGCAEST: gi|24205492|gb|BU964745.1|BU964745
genomic: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAGgttatagctc ... aaattttcagCCCAGAACAACAGCAACAGCA
EST: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAG CCCAGAACAACAGCAACAGCAGGCAGACCAGAACAACGCTGCAATGGATTTEST: gi|21888203|gb|BQ741416.1|BQ741416
genomic: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAGgttatagctc ... aaattttcagCCCAGAACAACAGCAACAGCAGGCAGACCAGAACAACGCTGCAATGGATTT
EST: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAG CCCAGAACAACAGCAACAGCAGGCAGACCAGAACAACGCTGCAATGGATTT
genomic: TTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAGgttatagctc ... aaattttcagCCCAGAACAACAGCAACAGCAGGCAGACCAGAACAACGCTGCAATGGATTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAAAGACGAAGGAAGCCGAACGTTCACCATGAGAGAATTGCTGAACGGATTGAAAAACGATTCCGAACCGGAGAGAGAAGATGGCAACTCCCCCTACAGgttatagctctttttcctaactgaatcaagaaaatgaaaaacgacaatgcgttcaatttttcttgttgatgcaactacggaacagtagaacacaaaaatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaatga