1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATATGATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatacttccgttcactgtttacttctccgttgtgctgatactcaacgatgtcgttttgtatagttgagattaatttgtagaatttatgaaggtttg...
species | Glycine max |
transcript | GLYMA19G36630.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTAT GTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAGEST: gi|151393153|gb|EV263028.1|EV263028
genomic: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatact ... atcgtttcagGTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
EST: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTAT GTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAGEST: gi|26045675|gb|CA783183.1|CA783183
genomic: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatact ... atcgtttcagGTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
EST: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTAT GTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAGEST: gi|298170787|gb|HO015763.1|HO015763
genomic: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatact ... atcgtttcagGTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
EST: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTAT GTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAGEST: gi|192304064|gb|FG993894.1|FG993894
genomic: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatact ... atcgtttcagGTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
EST: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTAT GTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAGEST: gi|298177311|gb|HO027092.1|HO027092
genomic: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatact ... atcgtttcagGTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
EST: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTAT GTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAGEST: gi|298165993|gb|HO008964.1|HO008964
genomic: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatact ... atcgtttcagGTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
EST: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTAT GTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAGEST: gi|298182073|gb|HO026248.1|HO026248
genomic: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatact ... atcgtttcagGTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
EST: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTAT GTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAGEST: gi|26045783|gb|CA783264.1|CA783264
genomic: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatact ... atcgtttcagGTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
EST: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTAT GTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
genomic: GATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatact ... atcgtttcagGTATCAAGAATTGGCTGAGAAATATAATGTGGAGTACATTGCTGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGATATCACCTCGAACAATGCGATTCTTGCGGAGGACAAGCACAAGCCTATgtaagatacttccgttcactgtttacttctccgttgtgctgatactcaacgatgtcgttttgtatagttgagattaatttgtagaatttatgaaggtttg
- - - - - - - - - - - - - - - - GGAGGA