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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTGTACATCAGTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctgtgttctgtgttctgtcttattccttttttttttaaatgacctattcagtattcaccttaatttttatttttatttatccattatttaata...

Basic information

species Glycine max
transcript GLYMA19G36080.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298171848|gb|HO021440.1|HO021440
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|298186201|gb|HO036834.1|HO036834
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAAGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|19270375|gb|BM886631.1|BM886631
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|58023997|gb|CX710738.1|CX710738
EST:     CGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACNTACAAAACAGGCCT
genomic: CGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|19270064|gb|BM886320.1|BM886320
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|213594334|gb|DB969984.1|DB969984
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|208133633|gb|GD929522.1|GD929522
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGG
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGG
EST: gi|213590581|gb|DB973326.1|DB973326
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|13252020|gb|BG362914.1|BG362914
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|151412174|gb|EV281986.1|EV281986
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|208268036|gb|GE070739.1|GE070739
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGG
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGG
EST: gi|254313549|gb|GR831178.1|GR831178
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|192318324|gb|FK011008.1|FK011008
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|193389371|gb|FK353976.1|FK353976
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|192326240|gb|FK015832.1|FK015832
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAGG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|213600537|gb|DB960085.1|DB960085
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|209727125|gb|BW663267.1|BW663267
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|254332640|gb|GR844010.1|GR844010
EST:     GCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|9204038|gb|BE330262.1|BE330262
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|151406211|gb|EV276026.1|EV276026
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|209701114|gb|BW652642.1|BW652642
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|58024173|gb|CX710914.1|CX710914
EST:     GCGTGTTGGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACNTACAAAACAGGCCT
genomic: GCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|207823570|gb|GD794147.1|GD794147
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|193329622|gb|FK293626.1|FK293626
EST:     CAGCGTGTTTGGTATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: CAGCGTGTTTGG-ATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|19452928|gb|BM954338.1|BM954338
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|19934788|gb|BQ079818.1|BQ079818
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
EST: gi|298180090|gb|HO025305.1|HO025305
EST:     GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAG                         GGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT
genomic: GTTATATTTGTCCCTATGCGCAGCGTGTTTGGATCACTCGGAACTATAAGgttgtttctg ... tatactgcagGGACTACAAGACAAGATCAAACTGGTTCCTATTGACCTACAAAACAGGCCT