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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAATTTGCAAGGCAACTTGGTTGTTGAGAAATTAGATAGCCTAATGGTGCTGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGAGgtaatcccatctataaaattacacatattgcgcacacgagtgcacacaacatattttagaagtgcatcaacaagacttcataatattctaattgttatctttgattag

Basic information

species Glycine max
transcript GLYMA16G21590.2
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254333248|gb|GR850498.1|GR850498
EST:     TGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGAG                         GTATTCGATACTCTACTAGCTTCATTTCAGAGAACCGTATTGAATGCGTAC
genomic: TGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGAGgtaatcccat ... ctttgattagGTATTCGATACTCTACTAGCTTCATTTCAGAGAACCGTATTGAATGCGTAC
EST: gi|193475675|gb|FK439390.1|FK439390
EST:     TGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGAG                         GTATTCGATACTCTACTAGCTTCATTTCAGAGAACCGTATTGAATGCGTAC
genomic: TGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGAGgtaatcccat ... ctttgattagGTATTCGATACTCTACTAGCTTCATTTCAGAGAACCGTATTGAATGCGTAC
EST: gi|15199487|gb|BI423855.1|BI423855
EST:     TGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGAG                         GTATTCGATACTCTACTAGCTTCATTTCAGAGAACCGTATTGAATGCGTAC
genomic: TGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGAGgtaatcccat ... ctttgattagGTATTCGATACTCTACTAGCTTCATTTCAGAGAACCGTATTGAATGCGTAC