1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
...atgccgtatattttgagtcttccgcttatatttcccataaattttatcatgttcattaatatttatctaataattatcatgatttttggcctttttacagCCTCCGTCAGAGTTATTAAATAGAAAAAATTTGCAAGGCAACTTGGTTGTTGAGAAATTAGATAGCCTAATGGTGCTGGCATTTTTGCACCTTGAATCCT
species | Glycine max |
transcript | GLYMA16G21590.2 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TAGAAGATGTTACTGAATTTGCAGATGAGGATGAGAATTGTGATAGTATG CCTCCGTCAGAGTTATTAAATAGAAAAAATTTGCAAGGCAACTTGGTTGTTEST: gi|193475675|gb|FK439390.1|FK439390
genomic: TAGAAGATGTTACTGAATTTGCAGATGAGGATGAGAATTGTGATAGTATGgtatgcatct ... ctttttacagCCTCCGTCAGAGTTATTAAATAGAAAAAATTTGCAAGGCAACTTGGTTGTT
EST: AATTTGCAGATGAGGATGAGAATTGTGATAGTATG CCTCCGTCAGAGTTATTAAATAGAAAAAATTTGCAAGGCAACTTGGTTGTT
genomic: AATTTGCAGATGAGGATGAGAATTGTGATAGTATGgtatgcatct ... ctttttacagCCTCCGTCAGAGTTATTAAATAGAAAAAATTTGCAAGGCAACTTGGTTGTT
atcatgttcattaatatttatctaataattatcatgatttttggcctttttacagCCTCCGTCAGAGTTATTAAATAGAAAAAATTTGCAAGGCAACTTGGTTGTTGAGAAATTAGATAGCCTAATGGTGCTGGCATTTTTGCACCTTGAATCCT
atctaat putative branch site (score: 3)
tttttggccttttt putative PPT
ttcattaatatttatc TA-rich tract