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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGCTTGTTGAGTTAGATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAGgtacattttgttcaccatatgttttctctaattagttatttaacttcacatcacactgtattcaagtcagtttctcattttacag

Basic information

species Glycine max
transcript GLYMA08G19920.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|21889596|gb|BQ742809.1|BQ742809
EST:     GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAG                         GCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
genomic: GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAGgtacattttg ... cattttacagGCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
EST: gi|298192475|gb|HO036557.1|HO036557
EST:     GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAG                         GCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
genomic: GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAGgtacattttg ... cattttacagGCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
EST: gi|27809133|gb|CB063555.1|CB063555
EST:     GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAG                         GCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
genomic: GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAGgtacattttg ... cattttacagGCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
EST: gi|57574066|gb|CX547041.1|CX547041
EST:     GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAG                         GCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
genomic: GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAGgtacattttg ... cattttacagGCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
EST: gi|192294149|gb|FG986238.1|FG986238
EST:     GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAG                         GCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
genomic: GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAGgtacattttg ... cattttacagGCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
EST: gi|209722218|gb|BW659356.1|BW659356
EST:     GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAG                         GCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
genomic: GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAGgtacattttg ... cattttacagGCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
EST: gi|298186613|gb|HO037246.1|HO037246
EST:     GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAG                         GCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT
genomic: GATGGCGCTGAACAACGAAAAGGTGTTTTTGTGATTGGTGCTACAAATAGgtacattttg ... cattttacagGCCTGAGGTGATGGATCGTGCTGTCCTACGGCCCGGAAGGTTTGGTAAACT