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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagcctattgttcactatttgtttggttgcatgcctgttacctattatgatagatgttgctaagtcagatttatgtttttgttttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG

Basic information

species Glycine max
transcript GLYMA06G18110.1
intron # 7
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA06G18110.5 (Glycine max), 3'ss of exon 7
lower sequence: LOC_Os02g38920.1 (Oryza sativa), 3'ss of exon 7
----------gtgagcctattgttcactatttgtttggttgcatgcctgttacctattatgatagatgttgctaagtcagatt-tatgtttttgttttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG
           |  || || | || |   |    |  ||   | |  || ||||   |||   |  || |   || |||  |  |     ||||  || | |  ||||||||||||||||||||||||| || ||    |||||||||||||||||||| ||||||   || |||||||||||||||||||||||||||||||||
gtaggcatcactttgcttaatattaatattggactgagtaaaacgtttggtaccatctatctgatctgatttcaattcaagtgattaacatttgaattccta--cagCTACCCAGAAGACTGTTGATGGGCCCTCGATGAAGGACTGGAGAGGTGGAAGGGCTGCTAGCTTCAACATCATTCCTAGCAGCACTGGAGCTGCCAAG

upper sequence: GLYMA06G18110.5 (Glycine max), 3'ss of exon 7
lower sequence: LOC_Os04g40950.1 (Oryza sativa), 3'ss of exon 7
gtgagcctattgttcactatttgtttggttgcatgcctgttacctattatgatagatgttgctaag--tcagatttatgt--ttttgttttgcaaatc----agCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG
               |  || | |   ||  |     ||||    ||| |  | |  |||||| ||  |    || ||||     |||  || || ||    ||| || |||||||| ||||||||||| ||   |||||||||||| |||||||| |||||    || |||||||| |||||||||||||||||||| |||
-------------gtatgatctttgaagtacctgtgatgttcttcattgttgtgg-cgttgcttagcatttctttgatgtaacactgtgctgtaattcttacagCAACTCAGAAGACCGTTGATGGACCCTCGAGCAAGGACTGGAGGGGTGGAAGGGCTGCCAGTTTCAACATCATCCCTAGCAGCACTGGAGCTGCAAAG

upper sequence: GLYMA06G18110.5 (Glycine max), 3'ss of exon 7
lower sequence: LOC_Os08g03290.4 (Oryza sativa), 3'ss of exon 7
gtgagcctattgttcactatttgtttggttgcatgcctgttacctattatgatagatgttgctaagtcagatttatgtttttgttttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG--
|| || || || ||  || ||||   | |   |||      | |||    |||      |  ||  | |   | ||||  |||||||      |||| ||||| ||||| ||||||||||| ||   |||||||||||| ||||| || || ||    |||||||||||||| ||||||||||| ||||||||   
gtaagact-ttcttggctttttggcagctaatatg---aacatcta----gatgttctgtaatagctaacgctgatgtacttgtttt------cagCCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAAGT

upper sequence: GLYMA06G18110.5 (Glycine max), 3'ss of exon 7
lower sequence: LOC_Os08g03290.3 (Oryza sativa), 3'ss of exon 6
gtgagcctattgttcactatttgtttggttgcatgcctgttacctattatgatagatgttgctaagtcagatttatgtttttgttttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG
|| || || || ||  || ||||   | |   |||      | |||    |||      |  ||  | |   | ||||  |||||||      |||| ||||| ||||| ||||||||||| ||   |||||||||||| ||||| || || ||    |||||||||||||| ||||||||||| |||||||| 
gtaagact-ttcttggctttttggcagctaatatg---aacatcta----gatgttctgtaatagctaacgctgatgtacttgtttt------cagCCACCCAAAAGACCGTTGATGGACCGTCCAGCAAGGACTGGAGGGGTGGCAGGGCGGCCAGTTTTAACATCATTCCCAGCAGCACTGGTGCTGCCAAA

upper sequence: GLYMA06G18110.5 (Glycine max), 3'ss of exon 7
lower sequence: GRMZM2G180625_T02 (Zea mays), 3'ss of exon 7
gtgagcctattgttcactatttgtt--tggttgcatgcctgttacctattatgatagatgttgctaagtcagatttatgtttttgttttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG
|||||     | ||  || |||     || |   | |   || |  || | |  | |  | ||  || | | |      |  |||  ||     ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || |||||    |||||||||||||| |||||||| || |||||||||
gtgagttctct-ttggctgtttagcaatgttgagaaggtagtcaggtactttagttg--gctgtaaaattacagcacgatgcttgcctt-----tcagCCACCCAGAAGACTGTTGATGGACCCTCAGCCAAGGACTGGAGAGGTGGCAGGGCTGCCAGCTTTAACATCATTCCCAGCAGCACCGGTGCTGCCAAG

upper sequence: GLYMA06G18110.5 (Glycine max), 3'ss of exon 7
lower sequence: GRMZM2G176307_T01 (Zea mays), 3'ss of exon 7
gtgagcctattgttcactatttgtttggttgcatgcctgttacctattatgatagatgttgctaagtcagatttatgtttttgttttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG
|| ||| ||  |      ||| |||   |   |    ||||   || | || | | |||   |||  | ||   ||||   |  |||      ||||||||||||||||||||||||| || ||| | ||||||||||| |||||||| ||||||   || ||||||||||| ||||||||||||||||| |||
gtaagcttagcgaa----attggttaaatgtaaaatttgtttagtaatctgtttgttgtctttaatgcggaga-atgtggatccttt------cagCTACCCAGAAGACTGTTGATGGGCCCTCATCTAAGGACTGGAGGGGTGGAAGGGCTGCTAGTTTCAACATCATTCCCAGCAGCACTGGAGCTGCTAAG

upper sequence: GLYMA06G18110.5 (Glycine max), 3'ss of exon 7
lower sequence: GRMZM2G046804_T02 (Zea mays), 3'ss of exon 7
gtgagcctattgttcactatttgtttggttgcatgcct--gttacctattatgatagatgttgctaagt-cagatttatgtttttgt-tttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG
           |||   | | |  |||| || || |||  | | | |   | | ||  ||  | |   |  | | | |     |  |  |||    ||||| |||||||| |||||||| ||||| ||||||||||||||||||||||| || |||||    ||||||||||||||||||||||| || |||||||||
-----------gttagttctct--ttggctgtattcctaggattcttcagaaggtacttgcagttgcctgtaaaatgacagcatgatgcttgactttcagCCACCCAGAAAACTGTTGACGGACCCTCAGCCAAGGACTGGAGAGGTGGCAGGGCTGCCAGCTTTAACATCATTCCTAGCAGCACCGGTGCTGCCAAG

upper sequence: GLYMA06G18110.5 (Glycine max), 3'ss of exon 7
lower sequence: GRMZM2G071630_T02 (Zea mays), 3'ss of exon 6
gtgagcctattgttcactatttgtttggttgcatgcctgttacctattatgatagatgttgctaagtcagatttatgtttttgttttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG
    |  |  | | |   ||| |||   | | |    |||     | | || | | || |  | |||    |  ||||   |  ||       ||||||||||||||||||||||||| || ||| | ||||||||||| |||||||| ||||||   || ||||||||||| ||||||||||||||||| |||
----gtatgctttgcgaaattggttgaatggaaactttgtctagcaatctgtttg-tgatcttcagtgtagtaaatgtggatccttg------cagCTACCCAGAAGACTGTTGATGGGCCCTCATCTAAGGACTGGAGGGGTGGAAGGGCTGCTAGTTTCAACATCATTCCCAGCAGCACTGGAGCTGCTAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33389709|gb|CA852916.1|CA852916
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|19937192|gb|BQ081190.1|BQ081190
EST:     CAGGTTTGTTATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16281862|gb|BI944708.1|BI944708
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16996724|gb|BM086096.1|BM086096
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16276402|gb|BI941840.1|BI941840
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|17963223|gb|BM269974.1|BM269974
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|24136619|gb|BU927129.1|BU927129
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|193395764|gb|FK364389.1|FK364389
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|20497911|gb|BQ272841.1|BQ272841
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|21637795|gb|BM107950.1|BM107950
EST:     CAGGTTTGGCATTGTTGARGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAARACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|37995973|gb|CF807562.1|CF807562
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAAACTGTTGATGGACCATCANCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16279470|gb|BI943453.1|BI943453
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|27424004|gb|CA935524.1|CA935524
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|209706837|gb|BW653129.1|BW653129
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|10709124|gb|BF008848.1|BF008848
EST:     CAGGTTTGGCATTGTTGAGGGTTTGA-GACCACTGTTCATTC-ATCACCG                         CTACCCAGAAGACTGT
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGT
EST: gi|16280823|gb|BI944164.1|BI944164
EST:     CAGGTTTGGCATTGNTGANGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATG-ACCATCAAGCCAAG
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCA-GCCAAG
EST: gi|16278226|gb|BI942793.1|BI942793
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|31560882|gb|CD486720.1|CD486720
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16277690|gb|BI942512.1|BI942512
EST:     CAGGTTTGGCATTGTTGATGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAATGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|193447809|gb|FK414074.1|FK414074
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGG
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGG
EST: gi|254320366|gb|GR826383.1|GR826383
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|33388557|gb|CA851764.1|CA851764
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAAAAGACTGTTGATG
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATG
EST: gi|254334654|gb|GR844439.1|GR844439
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|193443704|gb|FK406986.1|FK406986
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAG
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAG
EST: gi|193640048|gb|FK587141.1|FK587141
EST:     GGCATTGTTGAGGGTTTGATGACCACTGTTTCATTCCATCACCG                         CTACCCGGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: GGCATTGTTGAGGGTTTGATGACCACTG-TTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16283227|gb|BI945437.1|BI945437
EST:     CAGGTTTTGCATTGTTGAGGGGTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCTCAAG-ACTGGAGAGGTGGA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGC-CAAGGACTGGAGAGGTGGA
EST: gi|18734381|gb|BM528149.1|BM528149
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|209725750|gb|BW659879.1|BW659879
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16280570|gb|BI944030.1|BI944030
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|42722505|gb|CK768404.1|CK768404
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|23053006|gb|BU577497.1|BU577497
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|208056494|gb|GD850295.1|GD850295
EST:     ATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: ATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|22523984|gb|BU082795.1|BU082795
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|151402933|gb|EV272746.1|EV272746
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAG-ACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|193604411|gb|FK559432.1|FK559432
EST:     GGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCGGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: GGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|24136374|gb|BU926884.1|BU926884
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|22525989|gb|BU084800.1|BU084800
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16281901|gb|BI944728.1|BI944728
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16279550|gb|BI943494.1|BI943494
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|254322211|gb|GR837625.1|GR837625
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16279498|gb|BI943467.1|BI943467
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|120492921|gb|EH221088.1|EH221088
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|20207898|gb|BQ133987.1|BQ133987
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|208292312|gb|GE092412.1|GE092412
EST:     TTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: TTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16278876|gb|BI943140.1|BI943140
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|298191818|gb|HO035900.1|HO035900
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGCTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16284345|gb|BI946035.1|BI946035
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCCAAG-ACTGGAGAGGTGGA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCC-AAGGACTGGAGAGGTGGA
EST: gi|213600703|gb|DB968793.1|DB968793
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|37996056|gb|CF807645.1|CF807645
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGGAGAAGGTGG
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGG-AGA-GGTGG
EST: gi|16996609|gb|BM085981.1|BM085981
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCC
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCC
EST: gi|17153829|gb|BM143762.1|BM143762
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|15813337|gb|BI785612.1|BI785612
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|22524886|gb|BU083697.1|BU083697
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|48574825|gb|CO036096.1|CO036096
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|254327024|gb|GR836633.1|GR836633
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|17401792|gb|BM178574.1|BM178574
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|37994123|gb|CF805869.1|CF805869
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|15663691|gb|BI701062.1|BI701062
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAAGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|193488023|gb|FK454376.1|FK454376
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|33388380|gb|CA851587.1|CA851587
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CCACCCAAAAGACTGTTGATGGACCATCANCCAAGGACTGGAGAGG
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGG
EST: gi|15664053|gb|BI701424.1|BI701424
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|19935696|gb|BQ080546.1|BQ080546
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGA
EST: gi|37996539|gb|CF808128.1|CF808128
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|27445931|gb|CA953054.1|CA953054
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16279645|gb|BI943543.1|BI943543
EST:     AGGTTTGGCATTGTTGAGGGTTAGATGACCACTGTTCATGTC-ATTACCG                         CTACCCAGAAGACTGGTGAT
genomic: AGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCAT-TCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGAT
EST: gi|193362376|gb|FK324836.1|FK324836
EST:     AGGTTTGGCATTGTTGAGGGTTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAG
genomic: AGGTTTGGCATTGTTGAGGGTTT-GATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAG
EST: gi|16281890|gb|BI944722.1|BI944722
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16277368|gb|BI942343.1|BI942343
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGATCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|16277682|gb|BI942508.1|BI942508
EST:     CAGGTTTGGCATTGNTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|27425391|gb|CA936911.1|CA936911
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|208261017|gb|GE057841.1|GE057841
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAAGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|208300480|gb|GE097725.1|GE097725
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGA
EST: gi|37996738|gb|CF808327.1|CF808327
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGAC
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGAC
EST: gi|192322837|gb|FK014768.1|FK014768
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|298197763|gb|HO039302.1|HO039302
EST:     TGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: TGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|15589743|gb|BI674359.1|BI674359
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|20498687|gb|BQ273617.1|BQ273617
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|120493297|gb|EH221464.1|EH221464
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         GTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|26057093|gb|CA800007.1|CA800007
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|193354667|gb|FK323319.1|FK323319
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACT
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACT
EST: gi|16278416|gb|BI942893.1|BI942893
EST:     CAGGTTTGG-ATTGTTGAGGGTT-GATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|120493096|gb|EH221263.1|EH221263
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|21601528|gb|BQ611859.1|BQ611859
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|18730217|gb|BM525752.1|BM525752
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|37994317|gb|CF806063.1|CF806063
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|20497760|gb|BQ272690.1|BQ272690
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTTCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCACCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|19054169|gb|BM732836.1|BM732836
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
EST: gi|254332667|gb|GR844037.1|GR844037
EST:     CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCG                         CTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA
genomic: CAGGTTTGGCATTGTTGAGGGTTTGATGACCACTGTTCATTCCATCACCGgtgagcctat ... tgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acctattatgatagatgttgctaagtcagatttatgtttttgttttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG
                                    tttttgtttt  CT-rich tract
                             atttatgtttttgttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgagcctattgttcactatttgtttggttgcatgcctgttacctattatgatagatgttgctaagtcagatttatgtttttgttttgcaaatcagCTACCCAGAAGACTGTTGATGGACCATCAGCCAAGGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC