1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AAGGCTCACCAAGGATACGAGGAAGAGGGCGTGGTCGTGGAAGGGGCAGGGGTAGAGgtattgctaagtactttgtttcactcattcactgtagatgcctgtatcgtagttttcgaattttcataaatgctttcttggactcttttgtttttgttgttgttgttgtggtttctttaaaatgtaaaagctgcttatgagaacaaaatctgttcttag
species | Glycine max |
transcript | GLYMA04G39480.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ACCAAGGATACGAGGAAGAGGGCGTGGTCGTGGAAGGGGCAGGGGTAGAG GATTTTACAATGGGGGTATGGAATATGGTGATGGTTGGGATGGTGGACGTGEST: gi|254331475|gb|GR843432.1|GR843432
genomic: ACCAAGGATACGAGGAAGAGGGCGTGGTCGTGGAAGGGGCAGGGGTAGAGgtattgctaa ... ctgttcttagGATTTTACAATGGGGGTATGGAATATGGTGATGGTTGGGATGGTGGACGTG
EST: GGGCAGGGGTAGAG GATTTTACAATGGGGGTATGGAATATGGTGATGGTTGGGATGGTGGACGTGEST: gi|17962956|gb|BM269711.1|BM269711
genomic: GGGCAGGGGTAGAGgtattgctaa ... ctgttcttagGATTTTACAATGGGGGTATGGAATATGGTGATGGTTGGGATGGTGGACGTG
EST: ACCAAGGATACGAGGAAGAGGGCGTGGTCGTGGAAGGGGCAGGGGTAGAG GATTTTACAATGGGGGTATGGAATATGGTGATGGTTTGGGATGGTGGACGT
genomic: ACCAAGGATACGAGGAAGAGGGCGTGGTCGTGGAAGGGGCAGGGGTAGAGgtattgctaa ... ctgttcttagGATTTTACAATGGGGGTATGGAATATGGTGATGGTT-GGGATGGTGGACGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGGCTCACCAAGGATACGAGGAAGAGGGCGTGGTCGTGGAAGGGGCAGGGGTAGAGgtattgctaagtactttgtttcactcattcactgtagatgcctgtatcgtagttttcgaattttcataaatgctttcttggactcttttgtttttgttgttgttgttgtggtttctttaaaatgtaaaagctgcttatgagaacaaaatctgttcttag
- - - - - - - - - - GGAAGA
- - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - TGGAAG