1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGCGGCATAACGCAGTCACGAAAACAGGAAAGCGCGTCGGAATTGTCGACTTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAGgtgggtatcttgcagtgagctcttgggagcgaccgggcgcaatcgcgagtggacctatagtcgcgcacgctcattttatgtctatgcgacgtag
species | Chlamydomonas reinhardtii |
transcript | EDP04566 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAG GGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGGEST: gi|10191373|gb|BE761449.1|BE761449
genomic: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAGgtgggtatct ... tgcgacgtagGGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGG
EST: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAG GGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGGEST: gi|49465856|gb|BP093769.1|BP093769
genomic: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAGgtgggtatct ... tgcgacgtagGGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGG
EST: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAG GGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGGEST: gi|161821799|gb|FC110263.1|FC110263
genomic: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAGgtgggtatct ... tgcgacgtagGGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGG
EST: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAG GGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGGEST: gi|6543294|gb|AV389078.1|AV389078
genomic: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAGgtgggtatct ... tgcgacgtagGGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGG
EST: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAG GGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGG
genomic: TTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAGgtgggtatct ... tgcgacgtagGGTCCAACGGGGCCGTCACCAATGTGCGCGCTGACGCTTCAACACAATCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCGGCATAACGCAGTCACGAAAACAGGAAAGCGCGTCGGAATTGTCGACTTGCGATAGCGGTTCGTAGCTCGGGAAGCAAATCGCCGATATGACGCAAGgtgggtatcttgcagtgagctcttgggagcgaccgggcgcaatcgcgagtggacctatagtcgcgcacgctcattttatgtctatgcgacgtag
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