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TGCCGCGCGTGTGCGTCATCGGCGGCAAGGCCGCCTCCGCCTACGACATGGCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAAgtgagtaactaactgcaacgtagtaccgtgttgtaccgacggtagggaaatctagcgaagaatagaatccttaaaagtgcctgtgcccaacggcatggct...
species | Chlamydomonas reinhardtii |
transcript | EDO98385 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAA GGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAAEST: gi|16432476|gb|BI997702.1|BI997702
genomic: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAAgtgagtaact ... tcccccgaagGGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAA
EST: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAA GGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAAEST: gi|16072431|gb|BI874427.1|BI874427
genomic: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAAgtgagtaact ... tcccccgaagGGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAA
EST: CCAAGCGCATCATCCGCCTNCGTCACCGCCGTGGGCGAAGTCATCAACAA GGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAAEST: gi|161823203|gb|FC108203.1|FC108203
genomic: CCAAGCGCATCATCCGCCT-CGTCACCGCCGTGGGCGAAGTCATCAACAAgtgagtaact ... tcccccgaagGGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAA
EST: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAA GGACCCCGAGACTAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAAEST: gi|49458811|gb|BP086724.1|BP086724
genomic: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAAgtgagtaact ... tcccccgaagGGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAA
EST: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAA GGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAAEST: gi|161794546|gb|FC081954.1|FC081954
genomic: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAAgtgagtaact ... tcccccgaagGGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAA
EST: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAA GGACCCCGAGACTAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAAEST: gi|239840759|gb|GR282449.1|GR282449
genomic: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAAgtgagtaact ... tcccccgaagGGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAA
EST: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAA GGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAA
genomic: GCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAAgtgagtaact ... tcccccgaagGGACCCCGAGACCAAGGACTACCTGCGCCTGTACTTCCTGCCCGACTACAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGCCGCGCGTGTGCGTCATCGGCGGCAAGGCCGCCTCCGCCTACGACATGGCCAAGCGCATCATCCGCCTCGTCACCGCCGTGGGCGAAGTCATCAACAAgtgagtaactaactgcaacgtagtaccgtgttgtaccgacggtagggaaatctagcgaagaatagaatccttaaaagtgcctgtgcccaacggcatggct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cgtgttg
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