1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GCGGCAAGACCGAGGACTTCATCTCGGCCGCCAAGCTGTTTTACCGCGCCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAGgtgaggcgcaggcctttttttgggggggggggctgtagacaccagcccaaagtaaaccaaaccaagctaaactagcggagcacaggcagaggcgacaggt...
species | Chlamydomonas reinhardtii |
transcript | EDO97224 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAG GTGTGGGCGGACGTGTACACCATGCCCGTGCCEST: gi|10778595|gb|AV635275.1|AV635275
genomic: CCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAGgtgaggcgca ... ccgcacacagGTGTGGGCGGACGTGTACACCATGCCCGTGCC
EST: CCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAG GTGTGGGCGGACGTGTACACCATGCCCGTGCCCGGCTGCGACGGCAAGACCEST: gi|16431497|gb|BI996723.1|BI996723
genomic: CCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAGgtgaggcgca ... ccgcacacagGTGTGGGCGGACGTGTACACCATGCCCGTGCCCGGCTGCGACGGCAAGACC
EST: CCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAG GTGTGGGCGGACGTGTACACCATGCCCGTGCCCGGCTGCGACGGCAAGACCEST: gi|6542420|gb|AV388204.1|AV388204
genomic: CCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAGgtgaggcgca ... ccgcacacagGTGTGGGCGGACGTGTACACCATGCCCGTGCCCGGCTGCGACGGCAAGACC
EST: CCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAG GTGTGGGCGGACGTGTACACCATGCCCGTGCCCGGCTGCGACGGCAAGACC
genomic: CCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAGgtgaggcgca ... ccgcacacagGTGTGGGCGGACGTGTACACCATGCCCGTGCCCGGCTGCGACGGCAAGACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGGCAAGACCGAGGACTTCATCTCGGCCGCCAAGCTGTTTTACCGCGCCAAGCGCCAGGTCAAGGTGCCCACCTACCTGGTGCCAGCCACCCAGAAGgtgaggcgcaggcctttttttgggggggggggctgtagacaccagcccaaagtaaaccaaaccaagctaaactagcggagcacaggcagaggcgacaggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttttttt
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