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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTGGTTGATTGGTGTTATGCATATTGCAAGTTACGTGATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGgtgagccttgtcagatttttaattggtgatctgggggtggggggatgggggggctgtaagtatgatgccttttcattatttctgacaagggaatgaaagt...

Basic information

species Glycine max
transcript GLYMA16G21590.2
intron # 13
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9566005|gb|BE475576.1|BE475576
EST:     ATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAG                         GCCATTATGTATATTCTGTGTTTTCGCATGAGATCTTTGATGGATGTTCCT
genomic: ATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGgtgagccttg ... gtgtgagcagGCCATTATGTATATTCTGTGTTTTCGCATGAGATCTTTGATGGATATTCCT
EST: gi|15199487|gb|BI423855.1|BI423855
EST:     ATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAG                         GCCATTATGTATATTCTGTGTTTTCGCATGAGATCTTTGATGGATATTCCT
genomic: ATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGgtgagccttg ... gtgtgagcagGCCATTATGTATATTCTGTGTTTTCGCATGAGATCTTTGATGGATATTCCT
EST: gi|192298474|gb|FG988475.1|FG988475
EST:     ATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAG                         GCCATTATGTATATTCTGTGTTTTCGCATGAGATCTTTGATGGATATTCCT
genomic: ATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGgtgagccttg ... gtgtgagcagGCCATTATGTATATTCTGTGTTTTCGCATGAGATCTTTGATGGATATTCCT
EST: gi|10843968|gb|BF070884.1|BF070884
EST:     ATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAG                         GCCATTATGTATATTCTGTGTTTTCGCATGAGATCTTTGATGGATATTCCT
genomic: ATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGgtgagccttg ... gtgtgagcagGCCATTATGTATATTCTGTGTTTTCGCATGAGATCTTTGATGGATATTCCT