1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...tgggtaactaactgagcagtctttatccactatcaaaatgcttcacttctttgtagtccctttatgagattcagatgttgatatgatggatttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTGCAGATGGAACTCAACAGTGGGCTTTCCTGACAGACGCCTTGGCAAGAT
species | Zea mays |
transcript | GRMZM2G178244_T01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACACCTGGAAATCTGCTACTEST: gi|31351801|gb|CD436158.1|CD436158
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCCTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|148986861|gb|EE030663.2|EE030663
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211253577|gb|FL134850.1|FL134850
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211371885|gb|FK956909.1|FK956909
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|211369234|gb|FK956898.1|FK956898
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|76020500|gb|DT947670.1|DT947670
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|13381899|gb|BG458574.1|BG458574
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211369238|gb|FK956902.1|FK956902
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAA-TGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|211371893|gb|FK956917.1|FK956917
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTAYCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|149005487|gb|EE040045.2|EE040045
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|60351214|gb|DN218187.1|DN218187
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211371890|gb|FK956914.1|FK956914
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTT-CTCTTCTGAATCAG GTTCTTGATGAGT-CCAGAAGGCTTTTGGGGAEST: gi|211374547|gb|FK956922.1|FK956922
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGA
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|148974489|gb|EE025272.2|EE025272
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|94478008|gb|EB706966.1|EB706966
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|101401867|gb|EB822568.1|EB822568
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211371887|gb|FK956911.1|FK956911
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAAATCTGCTACEST: gi|78109501|gb|DV527917.1|DV527917
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAA-TCTGCTAC
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211151254|gb|FL134846.1|FL134846
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|166511315|gb|EG321369.1|EG321369
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: CTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|30032025|gb|CB833876.1|CB833876
genomic: CTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211369230|gb|FK956894.1|FK956894
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGTAGTGCATTT-CTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|211369232|gb|FK956896.1|FK956896
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|78027635|gb|DV496022.1|DV496022
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|211253579|gb|FL134852.1|FL134852
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAN GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211371894|gb|FK956918.1|FK956918
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|76933701|gb|DV173556.1|DV173556
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211369235|gb|FK956899.1|FK956899
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|76933699|gb|DV173555.1|DV173555
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|91054889|gb|EB165307.1|EB165307
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|148974488|gb|EE025271.2|EE025271
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|28873701|gb|CB329653.1|CB329653
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|60351615|gb|DN218588.1|DN218588
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCCTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211253581|gb|FL134854.1|FL134854
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211369231|gb|FK956895.1|FK956895
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|60397788|gb|DN230604.1|DN230604
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|60394084|gb|DN226954.1|DN226954
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|148999174|gb|EE036091.2|EE036091
genomic: TATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: ATCACTTTCCCGTTCGAAGGGCATTTTCTTTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211253576|gb|FL134849.1|FL134849
genomic: ATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|71439602|gb|DR820652.1|DR820652
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211371892|gb|FK956916.1|FK956916
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|149081182|gb|EE170291.2|EE170291
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211371891|gb|FK956915.1|FK956915
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGAATCCTGGAAATCTGCTACTEST: gi|148999175|gb|EE036092.2|EE036092
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTEST: gi|211253578|gb|FL134851.1|FL134851
genomic: TTATGGATGATCACTATCCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
EST: TATGGATGATCACTATNCCTGTACGAAGTGCATTTTCTCTTCTGAATCAG GTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
genomic: TATGGATGATCACTAT-CCTGTACGAAGTGCATTTTCTCTTCTGAATCAGgtaccgacca ... tttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACT
cttctttgtagtccctttatgagattcagatgttgatatgatggatttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTGCAGATGGAACTCAACAGTGGGCTTTCCTGACAGACGCCTTGGCAAGAT
tgttgat putative branch site (score: 180)
tttatga TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgggtaactaactgagcagtctttatccactatcaaaatgcttcacttctttgtagtccctttatgagattcagatgttgatatgatggatttcatgaagGTTCTTGATGAGTACCAGAAGGCTTTTGGGGACTCCTGGAAATCTGCTACTGCAGATGGAACTCAACAGTGGGCTTTCCTGACAGACGCCTTGGCAAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - -atcaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgttgat