1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
GTACTGGCCCTTTGTCACATTATTTGAATGGGGAGCCAGTAGAAGCTGATCAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGgtatgttcctggcaactttcatgataatatttctgagcgcatacttcattgcactgatttgtacacatactccatattctgagacaggaagtttgtgttt...
species | Zea mays |
transcript | GRMZM2G052688_T01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATG GGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGAEST: gi|60396041|gb|DN228911.1|DN228911
genomic: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGgtatgttcct ... accaatacagGGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGA
EST: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATG GGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGAEST: gi|88755916|gb|DY540057.1|DY540057
genomic: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGgtatgttcct ... accaatacagGGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGA
EST: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATG GGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGAEST: gi|22935404|gb|BU571679.1|BU571679
genomic: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGgtatgttcct ... accaatacagGGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGA
EST: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATG GGCTCCTCAAGCATTCTTTACTGEST: gi|74233407|gb|DT641321.1|DT641321
genomic: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGgtatgttcct ... accaatacagGGCTCCTCAAGCATTCTTTACTG
EST: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATG GGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGAEST: gi|87156124|gb|DY400913.1|DY400913
genomic: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGgtatgttcct ... accaatacagGGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGA
EST: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATG GGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGA
genomic: CAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGgtatgttcct ... accaatacagGGCTCCTCAAGCATTCTTTACTGGTGACACCGCAAACAACTTGGGGCCTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACTGGCCCTTTGTCACATTATTTGAATGGGGAGCCAGTAGAAGCTGATCAAGCTTGGAAATCAAGTGTTCAGCATGTCCATGAGAAATGCATTGAATGgtatgttcctggcaactttcatgataatatttctgagcgcatacttcattgcactgatttgtacacatactccatattctgagacaggaagtttgtgttt
- - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT