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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gttagtttgtgtatttgtgatgatcatactgttccattttggctttggtttgtgataacaaatggtaatttgcttgtgaaattttgctcttgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGGGAGATATATGATCAATACGGAGAAGATGCTCTGAAAGAAGGAATGGGTG

Basic information

species Vitis vinifera
transcript Vv13s0073g00560.t01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv13s0073g00560.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os03g57340.1 (Oryza sativa), 3'ss of exon 1
-----gttagtttgtgtatttgtgat--gatcatactgttccattttggctttggtttgtgataacaaatggtaatttgcttgtgaaattttgctcttgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGGGAGATATATGATCAATACGGAGAAGATGCTCTGAAAGAAGGAATGGGTG
       |   |||   ||   | ||  | | |  ||||   ||   | |  | | ||     |  | |||| ||  |       || | ||||  |  |  || |||| || || ||||| || |||||||| ||  |||| ||||| |||||||| || || |||||||| ||||| ||||||||||| || || || |||||| 
tgagtactgaattgccaatgctttatctggttaagctgtatgatggggacaatagctttcttgatgagatggcaaacta-----aaattcttgccttcat--ttcagTTCAAGGAATTGGCTCAGGCTTATGAAGTCCTGAGTGACCCTGAGAAGCGTGAAATCTATGATCAGTACGGTGAAGATGCTCTCAAGGAGGGGATGGGTC
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110693853|gb|EE070447.1|EE070447
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161707492|gb|FC055997.1|FC055997
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110724863|gb|EE101065.1|EE101065
EST:     ACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: ACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161716047|gb|FC069120.1|FC069120
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|294965649|gb|GW837248.1|GW837248
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110687574|gb|EE065142.1|EE065142
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161720070|gb|FC066726.1|FC066726
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110727911|gb|EE105214.1|EE105214
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161710472|gb|FC058522.1|FC058522
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTT
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTT
EST: gi|26257505|gb|CA808568.1|CA808568
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161718145|gb|FC068894.1|FC068894
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|10283309|gb|BE846432.1|BE846432
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161721807|gb|FC070158.1|FC070158
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110367088|gb|EC931010.1|EC931010
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|37183602|gb|CF602956.1|CF602956
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110380006|gb|EC945241.1|EC945241
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110687757|gb|EE065533.1|EE065533
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110689394|gb|EE065590.1|EE065590
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTT--GAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161719134|gb|FC069349.1|FC069349
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110700663|gb|EE077516.1|EE077516
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|71858214|gb|DT007269.1|DT007269
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110732660|gb|EE108151.1|EE108151
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161716635|gb|FC069142.1|FC069142
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161716378|gb|FC064903.1|FC064903
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110356751|gb|EC919805.1|EC919805
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161717969|gb|FC069264.1|FC069264
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110708416|gb|EE085929.1|EE085929
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110721365|gb|EE098283.1|EE098283
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161708390|gb|FC057854.1|FC057854
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110687093|gb|EE064204.1|EE064204
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|71863330|gb|DT012385.1|DT012385
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110703858|gb|EE081072.1|EE081072
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161720402|gb|FC069851.1|FC069851
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161708681|gb|FC059210.1|FC059210
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161719216|gb|FC065444.1|FC065444
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|161720382|gb|FC070180.1|FC070180
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
EST: gi|110370683|gb|EC932670.1|EC932670
EST:     GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAG                         TTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG
genomic: GGAAGGCGGCGATCAAGAACCACCCTGACAAGGGTGGTGACCCGGAGAAGgtactggttt ... tgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tggtttgtgataacaaatggtaatttgcttgtgaaattttgctcttgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGGGAGATATATGATCAATACGGAGAAGATGCTCTGAAAGAAGGAATGGGTG
       tgataac  putative branch site (score: 2)
                                    ttttgctcttgtcttt  putative PPT
         ataacaaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttagtttgtgtatttgtgatgatcatactgttccattttggctttggtttgtgataacaaatggtaatttgcttgtgaaattttgctcttgtcttttagTTTAAAGAGTTGGCACAAGCTTATGAGGTATTGAGCGACCCGGAGAAGCGGGAGATATATGATCAATACGGAGAAGATGCTCTGAAAGAAGGAATGGGTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - catactg
- - - - - - - - - - - - - - - - -ccatttt
- - - - - - - - - - - - - - - - - - - - - - -tggtttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - aacaaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcttgtg