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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattcagaagactattctgcgcctgaataatgaagcacgattctttttaataaagggtgatgtatcaatgacattagtaagttgttgatatcttaa...

Basic information

species Physcomitrella patens
transcript PP1S99_59V6.2
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208372666|gb|DC952401.1|DC952401
EST:     GGTTTTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208367744|gb|DC943990.1|DC943990
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208367480|gb|DC954940.1|DC954940
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208362286|gb|DC954532.1|DC954532
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208362869|gb|DC950819.1|DC950819
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208372849|gb|DC956250.1|DC956250
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208386432|gb|DC949119.1|DC949119
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|18332636|gb|BJ164649.1|BJ164649
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|162161188|gb|FC337251.1|FC337251
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208375226|gb|DC948751.1|DC948751
EST:     GGCTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208363947|gb|DC950351.1|DC950351
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208397247|gb|DC920876.1|DC920876
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208366289|gb|DC943835.1|DC943835
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208363068|gb|DC957995.1|DC957995
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|162177043|gb|FC353096.1|FC353096
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|37844507|gb|BJ602515.1|BJ602515
EST:     GNTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208372302|gb|DC948491.1|DC948491
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208369171|gb|DC956046.1|DC956046
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|67723723|gb|BJ973982.1|BJ973982
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208366442|gb|DC947610.1|DC947610
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208370554|gb|DC951590.1|DC951590
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208368605|gb|DC947922.1|DC947922
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208390945|gb|DC945934.1|DC945934
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208367603|gb|DC954979.1|DC954979
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208390278|gb|DC949518.1|DC949518
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|162280154|gb|FC455963.1|FC455963
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208369757|gb|DC951888.1|DC951888
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208381939|gb|DC923449.1|DC923449
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208367822|gb|DC944068.1|DC944068
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGCGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|37822246|gb|BJ580312.1|BJ580312
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208391966|gb|DC949429.1|DC949429
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208387185|gb|DC945484.1|DC945484
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208385469|gb|DC953088.1|DC953088
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208398833|gb|DC920781.1|DC920781
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|37834809|gb|BJ592821.1|BJ592821
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|162280155|gb|FC455964.1|FC455964
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208366370|gb|DC943874.1|DC943874
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208369942|gb|DC944280.1|DC944280
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|67725969|gb|BJ976228.1|BJ976228
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|67727485|gb|BJ977744.1|BJ977744
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208372820|gb|DC956221.1|DC956221
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208369940|gb|DC944278.1|DC944278
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTNCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208373621|gb|DC952446.1|DC952446
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208370482|gb|DC952185.1|DC952185
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208365441|gb|DC950908.1|DC950908
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|208392926|gb|DC928612.1|DC928612
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
EST: gi|67727277|gb|BJ977536.1|BJ977536
EST:     GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGG                         ATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG
genomic: GGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattca ... cccttgacagATATGGTGGAGGGATGAGCTCTGCCAAAGCTGCACTTGAGAGTGACACACG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTGGTTCTTCGCTTTCACTCACATACGTCGCATCCGAGCAGATCATCCCTGGgtaagattcagaagactattctgcgcctgaataatgaagcacgattctttttaataaagggtgatgtatcaatgacattagtaagttgttgatatcttaa

- - - - - - - - - - - - - - - - -  GAGCAG
- - - - - - - - - - - - - - - - - -  GCAGAT
- - - - - - - - - - - - - - - - - - -  AGATCA