1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtgagtgcttcatctatcaaattttacgttgctctactttgtgacttggtctgggactgttggcactacgacttctcgcttttaaattacatagtgcttgatcagtgtttaaaactggttgctcatattttgtagGAAGAATCACCGGAAGAGCCAGCAATTACTGGGGTTTTGGTGTATATTGGATCCCCAAATAGGTTGAAAAACCAGTACTATTTGGGGCCAGCTTCTCTCC
species | Physcomitrella patens |
transcript | PP1S56_10V6.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGCTACGAGAGTTTGAGTATGACGTGCGGGCTTTCGTTGACTTCTACACA GAAGAATCACCGGAAGAGCCAGCAATTACTGGGGTTTTGGTGTATATTGGAEST: gi|208354513|gb|DC926648.1|DC926648
genomic: AGCTACGAGAGTTTGAGTATGACGTGCGGGCTTTCGTTGACTTCTACACAgtgagtgctt ... tattttgtagGAAGAATCACCGGAAGAGCCAGCAATTACTGGGGTTTTGGTGTATATTGGA
EST: AGCTACGAGAGTTTGAGTATGACGTGCGGGCTTTCGTTGACTTCTACACA GAAGAATCACCGGAAGAGCCAGCAATTACTGGGGTTTTGGTGTATATTGGAEST: gi|162172118|gb|FC349333.1|FC349333
genomic: AGCTACGAGAGTTTGAGTATGACGTGCGGGCTTTCGTTGACTTCTACACAgtgagtgctt ... tattttgtagGAAGAATCACCGGAAGAGCCAGCAATTACTGGGGTTTTGGTGTATATTGGA
EST: AGCTACGAGAGTTTGAGTATGACGTGCGGGCTTTCGTTGACTTCTACACA GAAGAATCACCGGAAGAGCCAGCAATTACTGGGGTTTTGGTGTATATTGGA
genomic: AGCTACGAGAGTTTGAGTATGACGTGCGGGCTTTCGTTGACTTCTACACAgtgagtgctt ... tattttgtagGAAGAATCACCGGAAGAGCCAGCAATTACTGGGGTTTTGGTGTATATTGGA
tttaaattacatagtgcttgatcagtgtttaaaactggttgctcatattttgtagGAAGAATCACCGGAAGAGCCAGCAATTACTGGGGTTTTGGTGTATATTGGATCCCCAAATAGGTTGAAAAACCAGTACTATTTGGGGCCAGCTTCTCTCC
gcttgat putative branch site (score: 1)
atattttgta TA-rich tract