1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...tgtgtcttagtgaagagtgctagtactagtacggtttttggcgaacgcctggcgcctatgcccactctgatatagtaatacggtaacttttggtatacagGGGTTTGCTCGTCTCAGTGCTGTCTACGGCGGCACCTACATGCTTGCCAAACCCGAGTGCAAG
species | Physcomitrella patens |
transcript | PP1S100_23V6.1 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CGGCGAGTTGCCACAG GGGTTTGCTCGTCTCAGTGCTGTCTACGGCGGCACCTACATGCTTGCCAAAEST: gi|162225722|gb|FC401864.1|FC401864
genomic: CGGCGAGTTGCCACAGgttaggaatt ... tggtatacagGGGTTTGCTCGTCTCAGTGCTGTCTACGGCGGCACCTACATGCTTGCCAAA
EST: GAGGATCACCCTACATTTATCCGCTATATGGCCTCGGCGAGTTGCCACAG GGGTTTGCTCGTCTCAGTGCTGTCTACGGCGGCACCTACATGCTTGCCAAAEST: gi|67575484|gb|BJ948308.1|BJ948308
genomic: GAGGATCACCCTACATTTATCCGCTATATGGCCTCGGCGAGTTGCCACAGgttaggaatt ... tggtatacagGGGTTTGCTCGTCTCAGTGCTGTCTACGGCGGCACCTACATGCTTGCCAAA
EST: GAGGATCACCCTACATTTATCCGCTATATGGCCTCGGCGAGTTGCCACAG GGGTTTGCTCGTCTCAGTGCTGTCTACGGCGGCACCTACATGCTTGCCAAA
genomic: GAGGATCACCCTACATTTATCCGCTATATGGCCTCGGCGAGTTGCCACAGgttaggaatt ... tggtatacagGGGTTTGCTCGTCTCAGTGCTGTCTACGGCGGCACCTACATGCTTGCCAAA
cgcctggcgcctatgcccactctgatatagtaatacggtaacttttggtatacagGGGTTTGCTCGTCTCAGTGCTGTCTACGGCGGCACCTACATGCTTGCCAAACCCGAGTGCAAG
cggtaac putative branch site (score: 4)
ctttt CT-rich tract
atatagtaata TA-rich tract