1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGgtactgctggaacttcaggtggtactgattcaagaaatagataatcactataactttgttgtaaccattcatatcaacatgtccttttattttattgatt...
species | Oryza sativa |
transcript | LOC_Os04g35920.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAG ATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAEST: gi|58672500|gb|CK061186.1|CK061186
genomic: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGgtactgctgg ... tgtctcgtagATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAA
EST: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAG ATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAEST: gi|38469103|gb|CF953234.1|CF953234
genomic: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGgtactgctgg ... tgtctcgtagATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAA
EST: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAG ATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAEST: gi|29681022|gb|CB677297.1|CB677297
genomic: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGgtactgctgg ... tgtctcgtagATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAA
EST: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAG ATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAAEST: gi|7168822|gb|AU062730.2|AU062730
genomic: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGgtactgctgg ... tgtctcgtagATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAA
EST: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATNCGCAGAGGGAAAAAG ATGCTACAAGTGGCGGGATTTCTNGTTCTGCTCATGTCGCGGAAAACAAAA
genomic: AACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGgtactgctgg ... tgtctcgtagATGCTACAAGTGGCGGGATTTCTGGTTCTGCTCATGTCGCGGAAAACAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAATATGTTCTACGAGAGAATGCTAAGGAGAAGCCAACTTATATCTTAGTGCCAAAGAGAGACGAGCATGCGCAGAGGGAAAAAGgtactgctggaacttcaggtggtactgattcaagaaatagataatcactataactttgttgtaaccattcatatcaacatgtccttttattttattgatt
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