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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCTGCTGTTATGGGTGTTGGTCCTGCAGTAGCAATACCAGCTGCAGTGAAGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttactttttacaatattagctcactcgtttactcgtacctagctacaatggttgatacccatgccatctgtattcttgtatag

Basic information

species Oryza sativa
transcript LOC_Os02g57260.1
intron # 11
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g57260.1 (Oryza sativa), 5'ss of exon 11
lower sequence: GRMZM2G469466_T02 (Zea mays), 5'ss of exon 5
TCCTGCTGTTATGGGTGTTGGTCCTGCAGTAGCAATACCAGCTGCAGTGAAGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttactttttacaatattagctcactcgtttact-cgtacctagctacaatggttgatacccatgccatctgtattcttgtatag
||| ||| |||||||  |||||||||  || || || |  ||||| ||||||||||| || ||  |||||| |||||||||| |||||||| |||||||||| |||  |  ||  |   ||   | | ||| | |    | ||  || | | ||    ||||  |     ||||  |  |         
TCCAGCTATTATGGGCATTGGTCCTGTTGTGGCCATTCTTGCTGCTGTGAAGTCTGCAGGCCTTGAGATTGGAGACATTGATTTGTTTGAACTGAATGAGgtatgtgtcgattgccttgatctacaccctcttctctcacctatttatccataacatctgattactgaatcatccatgcttag------

upper sequence: LOC_Os02g57260.1 (Oryza sativa), 5'ss of exon 11
lower sequence: GRMZM2G152442_T01 (Zea mays), 5'ss of exon 3
TCCTGCTGTTATGGGTGTTGGTCCTGCAGTAGCAATACCAGCTGCAGTGAAGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttactttttacaatattagctcactcgtttact-cgtacctagctacaatggttgatacccatgccatctgtattcttgtatag
||| |||| |||||| ||||||||||| || || || || ||||| ||||||| ||| || ||  | |||| |||||||||| |||||||| |||||||||| |||  |  ||  |   ||   |   ||| | |    | ||  || | | ||    ||||  |     ||||  |  |         
TCCAGCTGATATGGGCGTTGGTCCTGCTGTGGCCATTCCTGCTGCTGTGAAGTTTGCAGGCCTTGAAATTGGAGACATTGATTTGTTTGAACTGAATGAGgtctgtgtcgattgccttgatctacatcctcttctctcacctatttatccataacatctgattactgaatcatccatgcttag------

upper sequence: LOC_Os02g57260.1 (Oryza sativa), 5'ss of exon 11
lower sequence: GRMZM5G848768_T03 (Zea mays), 5'ss of exon 11
TCCTGCTGTTATGGGTGTTGGTCCTGCAGTAGCAATACCAGCTGCAGTGAAGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttactttttacaatattagctcactcgtttact-cgtacctagctacaatggttgatacccatgccatctgtattcttgtatag
||| ||||||||||| ||||||||||| || || || || ||||| ||||||||||| || ||  |||||| |||||||||| |||||||| |||||||||| |||  |  ||  |   ||   | | ||| | |    | ||  || | | ||    ||||  |     ||||  |  |         
TCCAGCTGTTATGGGCGTTGGTCCTGCCGTGGCCATTCCTGCTGCTGTGAAGTCTGCAGGCCTTGAGATTGGAGACATTGATTTGTTTGAACTGAATGAGgtctgtgtcgattgccttgatctacaccctcttctctcacctatttatccataacatctgattactgaatcatccatgcttag------

upper sequence: LOC_Os02g57260.1 (Oryza sativa), 5'ss of exon 11
lower sequence: Vv05s0051g00720.t01 (Vitis vinifera), 5'ss of exon 11
TCCTGCTGTTATGGGTGTTGGTCCTGCAGTAGCAATACCAGCTGCAGTGAAGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgt------ttgttactttttacaatattagctcactcgtttactcgtacctagctacaatggttgatacccatgccatctgta-ttcttgtatag
|||||| || |||||| ||||||| || || ||||| ||||||||||| || |||||||| ||| |  |||| || |||||||| |||||| | ||||||||      |  | ||  |||   || ||   | |  | | ||    |  || | |  |     |   | |  ||   ||  |  ||||| |  ||
TCCTGCCGTCATGGGTATTGGTCCAGCTGTTGCAATTCCAGCTGCAGTCAAATCTGCTGGCCTCGAACTTGATGATATTGATCTTTTTGAAATAAATGAGgtgacaattaatgacaatttctgattttctttgaaccttgtaaagttgtcttgatttatgaaatataatctttgatttcattgcttcttttgcag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33653622|gb|CF276236.1|CF276236
EST:     GACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89187294|gb|CI047361.1|CI047361
EST:     AGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29641413|gb|CB646420.1|CB646420
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29675787|gb|CB672062.1|CB672062
EST:     AGTCTGTTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTGGCAGTTCGTGTATTGATGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88830027|gb|CI074699.1|CI074699
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88833631|gb|CI077112.1|CI077112
EST:     CCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88829213|gb|CI074083.1|CI074083
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86428850|gb|CI075531.1|CI075531
EST:     GAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89183969|gb|CI046534.1|CI046534
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29687501|gb|CB683776.1|CB683776
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29661675|gb|CB657950.1|CB657950
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86543971|gb|CI184177.1|CI184177
EST:     TCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29657028|gb|CB653303.1|CB653303
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|27577585|gb|CB000280.1|CB000280
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86434660|gb|CI105893.1|CI105893
EST:     ACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: ACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86432575|gb|CI086186.1|CI086186
EST:     GAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88836461|gb|CI078358.1|CI078358
EST:     TCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|10794621|gb|AU108587.1|AU108587
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTC-NTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88307931|gb|CI646366.1|CI646366
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTG
EST: gi|29669008|gb|CB665283.1|CB665283
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86431395|gb|CI085006.1|CI085006
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88850008|gb|CI091303.1|CI091303
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89176653|gb|CI111369.1|CI111369
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACGAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86260006|gb|CI065879.1|CI065879
EST:     TGTTTGAATTGGATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88983212|gb|CI020776.1|CI020776
EST:     GGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|44678959|gb|CR292393.1|CR292393
EST:     GATTGAAGACATGGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTTGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89198544|gb|CI016629.1|CI016629
EST:     CTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88908392|gb|CI090985.1|CI090985
EST:     CTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29670433|gb|CB666708.1|CB666708
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29687108|gb|CB683383.1|CB683383
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86430690|gb|CI083113.1|CI083113
EST:     CAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89179861|gb|CI044140.1|CI044140
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88845362|gb|CI084287.1|CI084287
EST:     GACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86412772|gb|CI067177.1|CI067177
EST:     TGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89192295|gb|CI049756.1|CI049756
EST:     CTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29672067|gb|CB668342.1|CB668342
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88828588|gb|CI073458.1|CI073458
EST:     GCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88907436|gb|CI090230.1|CI090230
EST:     CTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89184836|gb|CI048392.1|CI048392
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88244648|gb|CI243770.1|CI243770
EST:     CTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86425438|gb|CI070535.1|CI070535
EST:     GACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAATAAGCTGGGACTGGACAGG
genomic: GACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88849734|gb|CI089840.1|CI089840
EST:     ATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: ATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29670870|gb|CB667145.1|CB667145
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|218505530|gb|FG967454.1|FG967454
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTTGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89175516|gb|CI042537.1|CI042537
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88987695|gb|CI034554.1|CI034554
EST:     CTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGT
genomic: CTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86594263|gb|CI251135.1|CI251135
EST:     CCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACT-GACAGG
genomic: CCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89183854|gb|CI046419.1|CI046419
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88958432|gb|CI095950.1|CI095950
EST:     GCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29638251|gb|CB643260.1|CB643260
EST:     AGTATGCTGGACTCCAGATTGAAGACATTGATCTGTCTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCCGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29687732|gb|CB684007.1|CB684007
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88971527|gb|CI017841.1|CI017841
EST:     CTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTTGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29638249|gb|CB643258.1|CB643258
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29625703|gb|CB630714.1|CB630714
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTTGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88971501|gb|CI017815.1|CI017815
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29681654|gb|CB677929.1|CB677929
EST:     AGTTTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|27577745|gb|CB000440.1|CB000440
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29672874|gb|CB669149.1|CB669149
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86479233|gb|CI121866.1|CI121866
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29638749|gb|CB643758.1|CB643758
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29642434|gb|CB647441.1|CB647441
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88907844|gb|CI091242.1|CI091242
EST:     GAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89173771|gb|CI041664.1|CI041664
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86430585|gb|CI083008.1|CI083008
EST:     ATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: ATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|33653735|gb|CF276349.1|CF276349
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88850315|gb|CI091808.1|CI091808
EST:     GCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTCCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29663748|gb|CB660023.1|CB660023
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88831345|gb|CI083739.1|CI083739
EST:     CTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29646005|gb|CB651012.1|CB651012
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89187191|gb|CI047258.1|CI047258
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88849168|gb|CI087690.1|CI087690
EST:     TGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29663747|gb|CB660022.1|CB660022
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29687731|gb|CB684006.1|CB684006
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGAC
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGAC
EST: gi|29674399|gb|CB670674.1|CB670674
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86424978|gb|CI070075.1|CI070075
EST:     AAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88906080|gb|CI089666.1|CI089666
EST:     TCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88839437|gb|CI005225.1|CI005225
EST:     CCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|38471798|gb|CF955929.1|CF955929
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTTGTGTATTG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTG
EST: gi|88989793|gb|CI107480.1|CI107480
EST:     GTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|87026915|gb|CI259568.1|CI259568
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29683240|gb|CB679515.1|CB679515
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86258721|gb|CI065074.1|CI065074
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89175216|gb|CI111735.1|CI111735
EST:     TGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88243514|gb|CI244636.1|CI244636
EST:     ATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: ATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29683241|gb|CB679516.1|CB679516
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88828532|gb|CI073402.1|CI073402
EST:     GGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86425867|gb|CI070964.1|CI070964
EST:     AATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86420279|gb|CI056268.1|CI056268
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86905387|gb|CI285350.1|CI285350
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88833777|gb|CI077258.1|CI077258
EST:     ACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: ACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86414702|gb|CI069105.1|CI069105
EST:     TGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29664437|gb|CB660712.1|CB660712
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29663245|gb|CB659520.1|CB659520
EST:     AGTTTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29676716|gb|CB672991.1|CB672991
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|25800239|gb|CA756200.1|CA756200
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86493712|gb|CI136345.1|CI136345
EST:     TCTGCTGGACTCCCAGATTGAAGACATTGATTCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TCTGCTGGACT-CCAGATTGAAGACATTGA-TCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88972910|gb|CI019529.1|CI019529
EST:     GCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86477418|gb|CI120051.1|CI120051
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86415192|gb|CI069595.1|CI069595
EST:     CTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: CTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|88829747|gb|CI074617.1|CI074617
EST:     GATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29646729|gb|CB651736.1|CB651736
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86425661|gb|CI070758.1|CI070758
EST:     GAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: GAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29645372|gb|CB650379.1|CB650379
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|89176300|gb|CI043321.1|CI043321
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|29670912|gb|CB667187.1|CB667187
EST:     AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: AGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
EST: gi|86420541|gb|CI056530.1|CI056530
EST:     TCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAG                         GCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG
genomic: TCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 73 (upstream exon), 72 (downstream exon)
Score: 119

TCCTGCTGTTATGGGTGTTGGTCCTGCAGTAGCAATACCAGCTGCAGTGAAGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttact ... tcttgtatagGCCTTCGCTTCGCAGTTCGTGTATTGCTGCAACAAGCTGGGACTGGACAGGTCAAAAGTAAACGTGAATGGAGGCGCAATCGCCCTAGGACATCCTCTTG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TCCTGCTGTTATGGGTGTTGGTCCTGCAGTAGCAATACCAGCTGCAGTGAAGTCTGCTGGACTCCAGATTGAAGACATTGATCTGTTTGAATTGAATGAGgtttgttactttttacaatattagctcactcgtttactcgtacctagctacaatggttgatacccatgccatctgtattcttgtatag

- - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGA