1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ATAAGCCAGCCCTTCATCTCATCTGGAGATCTGGTTCTACTCATCCAGGAAAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagttacatcaaccaatttttgttatttcagtacttctttcccattcttcttcttcttcttcaactcggagtcttctacggtgtatatctcttcca...
species | Oryza sativa |
transcript | LOC_Os01g71590.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88406306|gb|CI596433.1|CI596433
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|29680926|gb|CB677201.1|CB677201
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|58604063|gb|CK014591.1|CK014591
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88361566|gb|CI605347.1|CI605347
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88357235|gb|CI616122.1|CI616122
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88356752|gb|CI619238.1|CI619238
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88357291|gb|CI622140.1|CI622140
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88399228|gb|CI618418.1|CI618418
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATTGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88422035|gb|CI611655.1|CI611655
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88729493|gb|CI753003.1|CI753003
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTNCTGCCAGATGCTTTCAEST: gi|58658388|gb|CK047068.1|CK047068
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|58663381|gb|CK052067.1|CK052067
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88350901|gb|CI620561.1|CI620561
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88301553|gb|CI597246.1|CI597246
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|29655883|gb|CB652158.1|CB652158
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: CAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88373323|gb|CI614659.1|CI614659
genomic: CAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|58669703|gb|CK058389.1|CK058389
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88359595|gb|CI621126.1|CI621126
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88341910|gb|CI643054.1|CI643054
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|58668871|gb|CK057557.1|CK057557
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|33673283|gb|CF301522.1|CF301522
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|117240086|gb|CT848247.1|CT848247
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88300596|gb|CI587400.1|CI587400
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88719949|gb|CI741884.1|CI741884
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88695274|gb|CI739312.1|CI739312
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88351158|gb|CI623380.1|CI623380
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|2309642|gb|C25797.1|C25797
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTTCCAGATGCTTTCAEST: gi|58683986|gb|CK072673.1|CK072673
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88402838|gb|CI613286.1|CI613286
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAGGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88405812|gb|CI609711.1|CI609711
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG GEST: gi|88405812|gb|CI609711.1|CI609711
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacag-
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG GEST: gi|88405812|gb|CI609711.1|CI609711
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacag-
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG GEST: gi|88727250|gb|CI750905.1|CI750905
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacag-
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|58663657|gb|CK052343.1|CK052343
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88717951|gb|CI739463.1|CI739463
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88434198|gb|CI589263.1|CI589263
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|58655266|gb|CK043946.1|CK043946
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88328388|gb|CI651402.1|CI651402
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88423769|gb|CI617121.1|CI617121
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAGTCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|569899|gb|D40748.1|D40748
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88745414|gb|CI768774.1|CI768774
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|58667427|gb|CK056113.1|CK056113
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|58674390|gb|CK063076.1|CK063076
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|58661318|gb|CK049998.1|CK049998
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATGCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88300028|gb|CI580089.1|CI580089
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCAAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88406465|gb|CI598958.1|CI598958
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88371341|gb|CI600189.1|CI600189
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGGCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|33676592|gb|CF304831.1|CF304831
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88354687|gb|CI613965.1|CI613965
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88362485|gb|CI623825.1|CI623825
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCGAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88294140|gb|CI667114.1|CI667114
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88398580|gb|CI598545.1|CI598545
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|88294643|gb|CI602363.1|CI602363
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGGCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGGCAGATGCTTTGAEST: gi|88405905|gb|CI591300.1|CI591300
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88421803|gb|CI621447.1|CI621447
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88361001|gb|CI625307.1|CI625307
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCGAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88315686|gb|CI617159.1|CI617159
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCAGATCATTTTCTGCCCAGATGCTTTCEST: gi|58658133|gb|CK046813.1|CK046813
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCC-AGATGCTTTC
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACAGTATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCEST: gi|88695968|gb|CI739543.1|CI739543
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACA-TATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTC
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88358682|gb|CI649231.1|CI649231
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88316868|gb|CI624310.1|CI624310
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|33676340|gb|CF304579.1|CF304579
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88397281|gb|CI580791.1|CI580791
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGGCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|58660697|gb|CK049377.1|CK049377
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCAEST: gi|88336970|gb|CI627050.1|CI627050
genomic: AAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: GAGGTCATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCAEST: gi|58676608|gb|CK065295.1|CK065295
genomic: GAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
EST: AAGGAGG-CATGTCGGAATCGGCCCTCG ACAAACATATAGTGGTGAAAATTCCCGATCATGTTCTGCCAGATGCTTTCA
genomic: AAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagtta ... cttgttacagACAAACATATAGTGGTGAAAATTCCCGATCATTTTCTGCCAGATGCTTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAAGCCAGCCCTTCATCTCATCTGGAGATCTGGTTCTACTCATCCAGGAAAGCCCCAATCTTTATCATAGCAAGGAGGTCATGTCGGAATCGGCCCTCGgtaatagttacatcaaccaatttttgttatttcagtacttctttcccattcttcttcttcttcttcaactcggagtcttctacggtgtatatctcttcca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG