1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GATTTGCTGGGTGATGATGCAGAGGACCCATCTCAGCAAATTGTTGCAGAACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTGgtctattctcttctcttcaatttgcattttttctttaaagattcttattattgttattcccagcaagcaaattgttgacttcttttgtgatag
species | Glycine max |
transcript | GLYMA20G39080.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTG TGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCGEST: gi|192325319|gb|FK017135.1|FK017135
genomic: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTGgtctattctc ... tttgtgatagTGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCG
EST: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTG TGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCGEST: gi|192322787|gb|FK014478.1|FK014478
genomic: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTGgtctattctc ... tttgtgatagTGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCG
EST: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTG TGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCGEST: gi|298183557|gb|HO028770.1|HO028770
genomic: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTGgtctattctc ... tttgtgatagTGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCG
EST: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTG TGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCGEST: gi|23057549|gb|BU578223.1|BU578223
genomic: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTGgtctattctc ... tttgtgatagTGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCG
EST: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTG TGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCG
genomic: ACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTGgtctattctc ... tttgtgatagTGAGGGAAGCAAGAAATGTAAATTCACGCGGTGGTCGAGGAAGTGGCCGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTTGCTGGGTGATGATGCAGAGGACCCATCTCAGCAAATTGTTGCAGAACAGCTCAAGGCTCAGCTTCCTACCAAGCCACTCCCTCCCTCTCAGGCTGgtctattctcttctcttcaatttgcattttttctttaaagattcttattattgttattcccagcaagcaaattgttgacttcttttgtgatag
- - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT