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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCGTTTGTCTACAGGCATTGTAGTAGCTGATATTGATTTATCATTTGTTGATTCAGTTAGAGAGAAAATGCCAATTGCTAAGgtaagtttgtaacatctatttatagccatggcacttatacattcaatcagggatatgaatcaagcaatggtaacaatgcattattcaacactttttatta...

Basic information

species Glycine max
transcript GLYMA20G38690.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7693255|gb|AW761350.1|AW761350
EST:     TTGATTTATCATTTGTTGATTCAGTTAGAGAGAAAATGCCAATTGCTAAG                         CAAAGAAAGCCAATTGACTTCTGGAAAGCTGCATCTCTATAG
genomic: TTGATTTATCATTTGTTGATTCAGTTAGAGAGAAAATGCCAATTGCTAAGgtaagtttgt ... ttggtttcagCAAAGAAAGCCAATTGACTTCTGGAAAGCTGCATCTCTATAG
EST: gi|9900235|gb|BE609203.1|BE609203
EST:     TTGATTTATCATTTGTTGATTCAGTTAGAGAGAAAATGCCAATTGCTAAG                         CAAAGAAAGCCA
genomic: TTGATTTATCATTTGTTGATTCAGTTAGAGAGAAAATGCCAATTGCTAAGgtaagtttgt ... ttggtttcagCAAAGAAAGCCA