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GTTGGAACAATATCTGCCAATGGGGAGAGGGAAATTGGTGAGTTAATTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCAgtaagttattgtatgttcatcttgtaaaaaaatattttattttggttttacaattttttccacggcctggggactgttttttcttttatttttttgtaat...
species | Glycine max |
transcript | GLYMA20G33910.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCA GATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAAGGAATGAAGCTCEST: gi|208046164|gb|GD848664.1|GD848664
genomic: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCAgtaagttatt ... actgtttcagGATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAAGGAATGAAGCTC
EST: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCA GATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAAGGAATGAAGCTCEST: gi|16281494|gb|BI944516.1|BI944516
genomic: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCAgtaagttatt ... actgtttcagGATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAAGGAATGAAGCTC
EST: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCA GATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAAGGAATGAAGCTCEST: gi|16277971|gb|BI942659.1|BI942659
genomic: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCAgtaagttatt ... actgtttcagGATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAAGGAATGAAGCTC
EST: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCA GATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAACGAATGAAGCTCEST: gi|209725419|gb|BW658281.1|BW658281
genomic: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCAgtaagttatt ... actgtttcagGATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAAGGAATGAAGCTC
EST: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCA GATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAAGGAATGAAGCTC
genomic: TTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCAgtaagttatt ... actgtttcagGATGGCAAGACATTGTACAATGAGTTGGAAGTCGTTGAAGGAATGAAGCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGGAACAATATCTGCCAATGGGGAGAGGGAAATTGGTGAGTTAATTGCAAAAGCTATGGAGAAAGTTGGCAAAGAGGGTGTCATCACAATCTCAgtaagttattgtatgttcatcttgtaaaaaaatattttattttggttttacaattttttccacggcctggggactgttttttcttttatttttttgtaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtaaaaaa