1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
ATATTTCGGAGTTGATATTAATGCCATACGAGAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCGGAGATAAGgttagtgttatggaatgacattttgatatcatagctgtctaagaaattataggttttaaattgagcaggagtaaaatcaatgaaaggaggctttgaatac...
species | Glycine max |
transcript | GLYMA20G33190.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCTGAGATAAG GGACTTTGATGCATTTGATCTACGEST: gi|193366950|gb|FK330740.1|FK330740
genomic: GAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCGGAGATAAGgttagtgtta ... gatgtagcagGGACTTTGATGCATTTGATCTACG
EST: GAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCGGAGATAAG GGACTTTGATGCATTTGATCTACGGAGGCGGACTTCCAGTTGTAGTTEST: gi|207766554|gb|GD736558.1|GD736558
genomic: GAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCGGAGATAAGgttagtgtta ... gatgtagcagGGACTTTGATGCATTTGATCTACGGAGGCGG-CTTCCAGTTGTAGTT
EST: GAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCGGAGATAAG GGACTTTGATGCATTTGATCTACGGAGGCGGCTTCCAGTTGTAGTTAGCAA
genomic: GAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCGGAGATAAGgttagtgtta ... gatgtagcagGGACTTTGATGCATTTGATCTACGGAGGCGGCTTCCAGTTGTAGTTAGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATTTCGGAGTTGATATTAATGCCATACGAGAATATGCCAAGACATGCAATGACATTCAACACTTGCGTGCGGAGATAAGgttagtgttatggaatgacattttgatatcatagctgtctaagaaattataggttttaaattgagcaggagtaaaatcaatgaaaggaggctttgaatac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT