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CTATGAGTACAAGTACATTGTTGATGGGGAATGGACATGCAATACAGATGAGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAAgtaagtttgaaatttcaactaaatagctcaaaagaaattctgcgattggtaacttactcctttgaatcctaggaaattgctggaagctcaaagctagaat...
species | Glycine max |
transcript | GLYMA20G33190.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: AGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAA GTCCTTGATGATACAAACAGAGTCCGTGCCTCCCTTCGGGAGAGATTGACCEST: gi|193591625|gb|FK548672.1|FK548672
genomic: AGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAAgtaagtttga ... ctccgaacagGTCCTTGATGATACAAACAGAGTCCGTGCCTCCCTTCGGGAGAGATTGACC
EST: AGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAA GTCCTTGATGATACAAACAGAGTCCGTGCCTCCCTTCGGGAGAGATTGACCEST: gi|24205704|gb|BU964957.1|BU964957
genomic: AGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAAgtaagtttga ... ctccgaacagGTCCTTGATGATACAAACAGAGTCCGTGCCTCCCTTCGGGAGAGATTGACC
EST: AGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAA GTCCTTGATGATACAAACAGAGTCCGTGCCTCCCTTCGGGAGAGATTGACCEST: gi|192321002|gb|FK013504.1|FK013504
genomic: AGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAAgtaagtttga ... ctccgaacagGTCCTTGATGATACAAACAGAGTCCGTGCCTCCCTTCGGGAGAGATTGACC
EST: AGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAA GTCCTTGATGATACAAACAGAGTCCATGCCTCCCTTCGGGAGAGATTGACC
genomic: AGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAAgtaagtttga ... ctccgaacagGTCCTTGATGATACAAACAGAGTCCGTGCCTCCCTTCGGGAGAGATTGACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATGAGTACAAGTACATTGTTGATGGGGAATGGACATGCAATACAGATGAGCTTGTAACCTCTCCCAACAAAGATGGCCATGTCAACAATTTTATTCAAgtaagtttgaaatttcaactaaatagctcaaaagaaattctgcgattggtaacttactcctttgaatcctaggaaattgctggaagctcaaagctagaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagaaa