1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ACTTTGATACTACCCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGgtatgatgattttactattaaattatacagctcaatataaatcataaatttgtaaggttgagttgataactactctattttttcatctcttaactttgga...
species | Glycine max |
transcript | GLYMA20G32260.1 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACGCAG GCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTTEST: gi|209702870|gb|BW655992.1|BW655992
genomic: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGgtatgatgat ... atgtctacagGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
EST: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAG GCAGCACTTTGCATTACAATTATGACAGTAGGTGTTGTATGTTCTGCTTTTEST: gi|209702922|gb|BW656019.1|BW656019
genomic: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGgtatgatgat ... atgtctacagGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
EST: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAG GCAGCACTTTGCATTACAATTATGACAGTAGGTGTTGTATGTTCTGCTTTTEST: gi|151404953|gb|EV274767.1|EV274767
genomic: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGgtatgatgat ... atgtctacagGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
EST: CTTGCGGGGCAAAGTGACACGAACACAG ACAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTTEST: gi|9819649|gb|BE555162.1|BE555162
genomic: CTTGCGGGGCAAAGTGACACGAACACAGgtatgatgat ... atgtctacagGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
EST: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAG GCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTTEST: gi|58017037|gb|CX703779.1|CX703779
genomic: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGgtatgatgat ... atgtctacagGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
EST: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAG GCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTTEST: gi|58025225|gb|CX711966.1|CX711966
genomic: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGgtatgatgat ... atgtctacagGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
EST: GACACGAACACAG GCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTTEST: gi|209710224|gb|BW653602.1|BW653602
genomic: GACACGAACACAGgtatgatgat ... atgtctacagGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
EST: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAG GCAGCACTTTGCATTACAATTATGACAGTAGGTGTTGTATGTTCTGCTTTTEST: gi|15202138|gb|BI425242.1|BI425242
genomic: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGgtatgatgat ... atgtctacagGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
EST: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAG GCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
genomic: CCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGgtatgatgat ... atgtctacagGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTTTGATACTACCCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAACACAGgtatgatgattttactattaaattatacagctcaatataaatcataaatttgtaaggttgagttgataactactctattttttcatctcttaactttgga
- - - - - - - - - - - - - - - - - - - - - GCAAAG