1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATGCTGACATGGAGGACTATGGCTTCGAGTACTCTGATGAGGAGCAAGAAGAGCAAGACGTTGATATCGAGAATCAATATTACAATTCAAAAGgttctgttctgctttttactgttgttgtttggcgttgctgaattaggaattgaagccagaaacttgttttgcggttgatcattatcactgtatcagtgtg...
species | Glycine max |
transcript | GLYMA19G17660.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GCAAGAAGAGCAAGACGTTGATATCGAGAATCAATATTACAATTCAAAAG GTATGGTTGAAAGTGATCCCGAAGGTGCGCTTGCTGGTTTTGCTCAGGTAGEST: gi|209701342|gb|BW655938.1|BW655938
genomic: GCAAGAAGAGCAAGACGTTGATATCGAGAATCAATATTACAATTCAAAAGgttctgttct ... ttgtgtgtagGTATGGTTGAAAGTGATCCCGAAGGTGCGCTTGCTGGTTTTGCTCAGGTAG
EST: GCAAGAAGAGCAAGACGTTGATATCGAGAATCAATATTACAATTCAAAAG GTATGGTTGAAAGTGATCCCGAAGGTGCGCTTGCTGGTTTTGCTCAGGTAGEST: gi|209709017|gb|BW673949.1|BW673949
genomic: GCAAGAAGAGCAAGACGTTGATATCGAGAATCAATATTACAATTCAAAAGgttctgttct ... ttgtgtgtagGTATGGTTGAAAGTGATCCCGAAGGTGCGCTTGCTGGTTTTGCTCAGGTAG
EST: GCAAGAAGAGCAAGACGTTGATATCGAGAATCAATATTACAATTCAAAAA GTATGGTTGAAAGTGATCCCGAAGGTGCGCTTGCTGGTTTTGCTCAGGTAG
genomic: GCAAGAAGAGCAAGACGTTGATATCGAGAATCAATATTACAATTCAAAAGgttctgttct ... ttgtgtgtagGTATGGTTGAAAGTGATCCCGAAGGTGCGCTTGCTGGTTTTGCTCAGGTAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCTGACATGGAGGACTATGGCTTCGAGTACTCTGATGAGGAGCAAGAAGAGCAAGACGTTGATATCGAGAATCAATATTACAATTCAAAAGgttctgttctgctttttactgttgttgtttggcgttgctgaattaggaattgaagccagaaacttgttttgcggttgatcattatcactgtatcagtgtg
- - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA