1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ATATGGCTGAGCGCCAGTGGGCAGATGCAGCTACTGATTTCTTTGATGCTTTCAAGAATTATGATGAAGCTGGTAGTCAGAGACGTATCCAATGTTTGAAgtaggtgaagcagcattctttttactatctgtatatagcaataactttatatttcacttcagcatataaaacaatgtaattaaccacaataactattttg...
species | Glycine max |
transcript | GLYMA19G17660.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TGGTAGTCAGAGACGTATCCAATGTTTGAA ATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGAEST: gi|27426986|gb|CA938506.1|CA938506
genomic: TGGTAGTCAGAGACGTATCCAATGTTTGAAgtaggtgaag ... tatgagtcagATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGA
EST: TTCAAGAATTATGATGAAGCTGGTAGTCAGAGACGTATCCAATGTTTGAA ATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGAEST: gi|15285921|gb|BI469812.1|BI469812
genomic: TTCAAGAATTATGATGAAGCTGGTAGTCAGAGACGTATCCAATGTTTGAAgtaggtgaag ... tatgagtcagATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGA
EST: TTCAAGAATTATGATGAAGCTGGTAGTCAGAGACGTATCCAATGTTTGAA ATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGAEST: gi|22523533|gb|BU082344.1|BU082344
genomic: TTCAAGAATTATGATGAAGCTGGTAGTCAGAGACGTATCCAATGTTTGAAgtaggtgaag ... tatgagtcagATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGA
EST: TTCAAGAATTATGATGAAGCTGGTAGTCAGAGACGTATCCAATGTTTGAA ATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGA
genomic: TTCAAGAATTATGATGAAGCTGGTAGTCAGAGACGTATCCAATGTTTGAAgtaggtgaag ... tatgagtcagATACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTAAATCCATTTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGGCTGAGCGCCAGTGGGCAGATGCAGCTACTGATTTCTTTGATGCTTTCAAGAATTATGATGAAGCTGGTAGTCAGAGACGTATCCAATGTTTGAAgtaggtgaagcagcattctttttactatctgtatatagcaataactttatatttcacttcagcatataaaacaatgtaattaaccacaataactattttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG