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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGAGGACTTGCGAACACTCACTCGCCACTGCTCACGAAACGTCGAAACCCTAAAACCTCGATTTTTCCCAATCCATTCCACACACAATATGGCTTCAGgtacgcgcttgttgttattgttgttgttgattatgcatttggtgttacgatgatgaaactaattgtttgattgattgtgtag

Basic information

species Glycine max
transcript GLYMA19G17660.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298193925|gb|HO040573.1|HO040573
EST:     CCTAAAACCTCGATTTTTCCCAATCCATTCCACACACAATATGGCTTCAG                         ATGCTGACATGGAGGACTATGGCTTCGAGTACTCTGATGAGGAGCAAGAAG
genomic: CCTAAAACCTCGATTTTTCCCAATCCATTCCACACACAATATGGCTTCAGgtacgcgctt ... gattgtgtagATGCTGACATGGAGGACTATGGCTTCGAGTACTCTGATGAGGAGCAAGAAG
EST: gi|209701342|gb|BW655938.1|BW655938
EST:     CCTAAAACCTCGATTTTTCCCAATCCATTCCACACACAATATGGCTTCAG                         ATGCTGACATGGAGGACTATGGCTTCGAGTACTCTGATGAGGAGCAAGAAG
genomic: CCTAAAACCTCGATTTTTCCCAATCCATTCCACACACAATATGGCTTCAGgtacgcgctt ... gattgtgtagATGCTGACATGGAGGACTATGGCTTCGAGTACTCTGATGAGGAGCAAGAAG
EST: gi|209709017|gb|BW673949.1|BW673949
EST:     CCTAAAACCTCGATTTTTCCCAATCCATTCCACACACAATATGGCTTCAG                         ATGCTGACATGGAGGACTATGGCTTCGAGTACTCTGATGAGGAGCAAGAAG
genomic: CCTAAAACCTCGATTTTTCCCAATCCATTCCACACACAATATGGCTTCAGgtacgcgctt ... gattgtgtagATGCTGACATGGAGGACTATGGCTTCGAGTACTCTGATGAGGAGCAAGAAG