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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTGAAGATTGATGCACGTGATATCAATGGAACAAGGTTTTCAGTCAACTTGTCTGACCTTCCTGCACGAATATTCCAGCATGAATTTGACCATCTACAAgtatgtttttcgacttggataactaaagcaactagtattttagtctgtgcataatacagaataaacatttatttctatatatttaaattcataataaata...

Basic information

species Glycine max
transcript GLYMA19G14000.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|23063553|gb|BU578565.1|BU578565
EST:     TGTCTGACCTTCCTGCACGAATATTCCAGCATGAATTTGACCATCTACAA                         GGAATTCTTTTCTTTGAGAGAATGACTGAAGAAGTTCTTGTTAGTATTTGT
genomic: TGTCTGACCTTCCTGCACGAATATTCCAGCATGAATTTGACCATCTACAAgtatgttttt ... gtgtctgcagGGAATTCTTTTCTTTGAGAGAATGACTGAAGAAGTTCTTGATAGTATTTGT
EST: gi|105633838|gb|DW247201.1|DW247201
EST:     TGTCTGACCTTCCTGCACGAATATTTCAGCATGAATTTGACCATCTACAA                         GGAATTCTTTTCTTTGAGAGAATGACTGAAGAAGTTCTTGATGGTATTTGT
genomic: TGTCTGACCTTCCTGCACGAATATTCCAGCATGAATTTGACCATCTACAAgtatgttttt ... gtgtctgcagGGAATTCTTTTCTTTGAGAGAATGACTGAAGAAGTTCTTGATAGTATTTGT
EST: gi|51336558|gb|CO980424.1|CO980424
EST:     TGTCTGACCTTCCTGCACGAATATTCCAGCATGAATTTGACCATCTACAA                         GGAATTCTTTTCTTTGAGAGAATGACTGAAGAAGTTCTTGATAGTATTTGT
genomic: TGTCTGACCTTCCTGCACGAATATTCCAGCATGAATTTGACCATCTACAAgtatgttttt ... gtgtctgcagGGAATTCTTTTCTTTGAGAGAATGACTGAAGAAGTTCTTGATAGTATTTGT