1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
GTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAAggtaaatgttgcatttaaggatgttattttcttcatttcattttatattgtcttattatttgtttaaccaatggtttactcgcacacatttataactactgta
species | Glycine max |
transcript | GLYMA18G47860.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAA GGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGGEST: gi|208253217|gb|GE054705.1|GE054705
genomic: TGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAAggtaaatgtt ... aactactgtaGGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGG
EST: TGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAA GGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCTEST: gi|208030395|gb|GD828853.1|GD828853
genomic: TGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAAggtaaatgtt ... aactactgtaGGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCT
EST: TGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAA GGCATACACAAGTEST: gi|6454585|gb|AW185268.1|AW185268
genomic: TGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAAggtaaatgtt ... aactactgtaGGCATACACAAGT
EST: TGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAA GGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGGEST: gi|151408304|gb|EV278112.1|EV278112
genomic: TGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAAggtaaatgtt ... aactactgtaGGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGG
EST: TGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAA GGCATATACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGGEST: gi|193471255|gb|FK438148.1|FK438148
genomic: TGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAAggtaaatgtt ... aactactgtaGGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGG
EST: TGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAA GGCATATACAAGT
genomic: TGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAAggtaaatgtt ... aactactgtaGGCATACACAAGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGGGCTGAGATTGGTGTGGCAAGTACCAAggtaaatgttgcatttaaggatgttattttcttcatttcattttatattgtcttattatttgtttaaccaatggtttactcgcacacatttataactactgta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG