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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGTTTGACACAAAGCATAGTGGAATACTTGATTTCAAAGAGTTTGCACTTGCTCTCTCTGTCTTTCATCCCAGCGCATCAATTGATGATAAGATTGAGTgtaagagtgactaatatttattaagattttagatatcttctagccaacaaaattagaaaggaaagagtatttgtaaaattatagatatctgttatttccctttctacatttgttattgatagtaatttatatggttgttggggattcctaactttcccttttttcag

Basic information

species Glycine max
transcript GLYMA09G01870.2
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA09G01870.2 (Glycine max), 5'ss of exon 5
lower sequence: AT4G26570.2 (Arabidopsis thaliana), 5'ss of exon 6
TTGTTTGACACAAAGCATAGTGGAATACTTGATTTCAAAGAGTTTGCACTTGCTCTCTCTGTCTTTCATCCCAGCGCATCAATTGATGATAAGATTGAGTgtaagagtgactaatatttattaag---attttagatatcttctagccaacaaaattagaaaggaaagagtatttgtaaaattatagatatctgttatttccctttctacatttgttattgatagtaatttatatggttgttggggattcctaactttcccttttttcag
||||||||||||||||||| ||||||||| |  ||  | |||||||| | ||||||||||||||||||||| |  ||  | || || || |||||||| |||| |  |   | ||  |||  |||   || | ||| | | ||||  |||   |  |      || |   ||  |||||      | |||||  | |           |   ||||| |  |                                                
TTGTTTGACACAAAGCATAATGGAATACTGGGGTTTGAGGAGTTTGCGCGTGCTCTCTCTGTCTTTCATCCAAATGCTCCCATAGAAGACAAGATTGACTgtacg--tctttgat-cttacaaagttgatctgagaaaccatctatacaatttatctgatgttgacatgctacatgtaacccatgaaatatcactaacagttaccgggaacattgttttgcag-----------------------------------------------