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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCAGAGAATGAGGTTCTTGTAAATGAATTTCTTCACGAGCATCACTATAGTGTTACTGATGAATTTGATGTCTCTGATCACATTCAAAACAGTGTTGAGgttagtacctattgtataaatgttagcattgaattaatggctaattttggatacagctttggtttgatgctcttttctggcctttgatgttgatctgctc...

Basic information

species Glycine max
transcript GLYMA08G20060.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193691238|gb|FK627493.1|FK627493
EST:     TGTTACTGATGAATTTGATGTCTCTGATCACATTCAAAACAGTGTTGAG                         GGGAAAATAAAGCAGACAATGGAGAAGGCCTTTTGGGATGGTATCATGGAA
genomic: TGTTACTGATGAATTTGATGTCTCTGATCACATTCAAAACAGTGTTGAGgttagtacct ... tatgttgcagGGGAAAATAAAGCAGACAATGGAGAAGGCCTTTTGGGATGGTATCATGGAA
EST: gi|207833666|gb|GD805371.1|GD805371
EST:     GTGTTACTGATGAATTTGATGTCTCTGATCACATTCAAAACAGTGTTGAG                         GGGAAAATAAAGCAGACAATGGAGAAGGCCTTTTGGGATGGTATCATGGAA
genomic: GTGTTACTGATGAATTTGATGTCTCTGATCACATTCAAAACAGTGTTGAGgttagtacct ... tatgttgcagGGGAAAATAAAGCAGACAATGGAGAAGGCCTTTTGGGATGGTATCATGGAA