1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...ccctcgctatacagcctcactccctatccatgtggcccactctcacctttcgttggttcccgcttccccttgcgcccccttggcacccccccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCTTCAAGGACGGCTTCCAGTCCAATGCCCCCCTGCCGCCCAGCTCATCCA
species | Chlamydomonas reinhardtii |
transcript | EDP07832 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CTTATGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10776753|gb|AV633433.1|AV633433
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34988219|gb|CF562136.1|CF562136
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34983887|gb|CF557804.1|CF557804
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10779248|gb|AV635928.1|AV635928
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6544452|gb|AV390236.1|AV390236
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10776191|gb|AV632871.1|AV632871
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6542788|gb|AV388572.1|AV388572
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCAEST: gi|6542059|gb|AV387843.1|AV387843
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCA
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10780118|gb|AV636798.1|AV636798
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|9210577|gb|BE337492.1|BE337492
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: GATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34983402|gb|CF557319.1|CF557319
genomic: GATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6544244|gb|AV390028.1|AV390028
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6545401|gb|AV391185.1|AV391185
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTNNCTCCGTGCCGCATCAGCCACCACGAGGGCCCCTCCCGGEST: gi|6542325|gb|AV388109.1|AV388109
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTT--CTCCG-GCCGCATCAGCCACCACGAGGGCCCCTCCCGG
EST: CAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10780838|gb|AV637518.1|AV637518
genomic: CAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34990185|gb|CF564102.1|CF564102
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10775408|gb|AV632088.1|AV632088
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10780031|gb|AV636711.1|AV636711
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|14227393|gb|BG846209.1|BG846209
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49460421|gb|BP088334.1|BP088334
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGEST: gi|34981554|gb|CF555471.1|CF555471
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCG
EST: TTTTGTGGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49459880|gb|BP087793.1|BP087793
genomic: TTTTGT-GCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6542250|gb|AV388034.1|AV388034
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10772439|gb|AV623262.1|AV623262
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10778536|gb|AV635216.1|AV635216
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10781048|gb|AV637728.1|AV637728
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|7687273|gb|AW757921.1|AW757921
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10778669|gb|AV635349.1|AV635349
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|7687738|gb|AW758384.1|AW758384
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34988220|gb|CF562137.1|CF562137
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCEST: gi|10780076|gb|AV636756.1|AV636756
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49460090|gb|BP088003.1|BP088003
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49460266|gb|BP088179.1|BP088179
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49462057|gb|BP089970.1|BP089970
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|7687682|gb|AW758328.1|AW758328
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10779455|gb|AV636135.1|AV636135
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49460483|gb|BP088396.1|BP088396
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|16071337|gb|BI873333.1|BI873333
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10780112|gb|AV636792.1|AV636792
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10782108|gb|AV638788.1|AV638788
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|9460535|gb|BE453283.1|BE453283
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6545492|gb|AV391276.1|AV391276
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10776977|gb|AV633657.1|AV633657
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10781631|gb|AV638311.1|AV638311
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34990184|gb|CF564101.1|CF564101
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGTCCAGATGATACCAAGGTCAAGAANTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49462074|gb|BP089987.1|BP089987
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49461313|gb|BP089226.1|BP089226
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34993452|gb|CF567369.1|CF567369
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10779484|gb|AV636164.1|AV636164
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: GCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10776764|gb|AV633444.1|AV633444
genomic: GCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6544035|gb|AV389819.1|AV389819
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10779084|gb|AV635764.1|AV635764
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6547382|gb|AV393166.1|AV393166
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10777454|gb|AV634134.1|AV634134
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|22062413|gb|BQ814801.1|BQ814801
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34983886|gb|CF557803.1|CF557803
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49460916|gb|BP088829.1|BP088829
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10776194|gb|AV632874.1|AV632874
genomic: CTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34983885|gb|CF557802.1|CF557802
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|7687656|gb|AW758302.1|AW758302
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34994529|gb|CF568446.1|CF568446
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAGCTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10779904|gb|AV636584.1|AV636584
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10775570|gb|AV632250.1|AV632250
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49459186|gb|BP087099.1|BP087099
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|14226530|gb|BG845362.1|BG845362
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10773872|gb|AV624695.1|AV624695
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: ACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10793390|gb|AV630756.1|AV630756
genomic: ACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34983401|gb|CF557318.1|CF557318
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6540822|gb|AV386606.1|AV386606
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10793954|gb|AV631320.1|AV631320
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCEST: gi|10782810|gb|AV639482.1|AV639482
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|7686910|gb|AW757558.1|AW757558
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|22065676|gb|BQ816492.1|BQ816492
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|6541933|gb|AV387717.1|AV387717
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49458445|gb|BP086358.1|BP086358
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCATCACGAGGGCCCCTCCCGGCCCEST: gi|10780980|gb|AV637660.1|AV637660
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10778098|gb|AV634778.1|AV634778
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTGGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10776039|gb|AV632719.1|AV632719
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10779162|gb|AV635842.1|AV635842
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|49462415|gb|BP090328.1|BP090328
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|34985475|gb|CF559392.1|CF559392
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCEST: gi|10770457|gb|AV621282.1|AV621282
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
EST: CTTTGGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCG GTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
genomic: CTTTTGTGCGTATCTTCAGCCCAGATGATACCAAGGTCAAGAACTACCCGgtgcgtgtgc ... ccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCC
cctttcgttggttcccgcttccccttgcgcccccttggcacccccccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCTTCAAGGACGGCTTCCAGTCCAATGCCCCCCTGCCGCCCAGCTCATCCA
cccccccgcct CT-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ccctcgctatacagcctcactccctatccatgtggcccactctcacctttcgttggttcccgcttccccttgcgcccccttggcacccccccgcctacagGTGAACAACTTCTCCGGCCGCATCAGCCACCACGAGGGCCCCTCCCGGCCCTTCAAGGACGGCTTCCAGTCCAATGCCCCCCTGCCGCCCAGCTCATCCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - atacagc
- - - - - - - - - actccct
- - - - - - - - - - - - - - - - - - - actctca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -caccccc