Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggctggccggggatcgagcgtgaaagcaaccttacaagatgggacagcccgcggaggcgccgtctccggccccaaggatgtgcagacttcgtactggtgcaccgcctgacgtgtccacacgctctggctgtacgcag

Basic information

species Chlamydomonas reinhardtii
transcript EDO98562
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161794603|gb|FC081985.1|FC081985
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|22056449|gb|BQ812338.1|BQ812338
EST:     GGACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: G-ACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161820431|gb|FC106971.1|FC106971
EST:     GACTTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161817509|gb|FC104153.1|FC104153
EST:     GCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161820089|gb|FC105810.1|FC105810
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|22055142|gb|BQ811690.1|BQ811690
EST:     GACCTCCGGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGAC-ACAANC
genomic: GACCTCCGG-CGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAA-C
EST: gi|22055465|gb|BQ811836.1|BQ811836
EST:     GACCTNCGGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGAC-ACAAAC
genomic: GACCTCCGG-CGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAA-C
EST: gi|10126718|gb|BE725294.1|BE725294
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|22059430|gb|BQ813423.1|BQ813423
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161794602|gb|FC081984.1|FC081984
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161801415|gb|FC091213.1|FC091213
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|6545633|gb|AV391417.1|AV391417
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|10773251|gb|AV624074.1|AV624074
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCC
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCC
EST: gi|22075488|gb|BQ824264.1|BQ824264
EST:     AGAACCTGACTG                         AGGAGGAGCTCCAAAAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: AGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161821609|gb|FC108734.1|FC108734
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161792540|gb|FC081794.1|FC081794
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|10788791|gb|AV626511.1|AV626511
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|49464181|gb|BP092094.1|BP092094
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         G
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcag-
EST: gi|49464181|gb|BP092094.1|BP092094
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         G
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcag-
EST: gi|161804143|gb|FC092176.1|FC092176
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161811366|gb|FC097974.1|FC097974
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161791783|gb|FC078353.1|FC078353
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACNACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|10191305|gb|BE761381.1|BE761381
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|9210661|gb|BE337576.1|BE337576
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|10779525|gb|AV636205.1|AV636205
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGA
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGA
EST: gi|161823500|gb|FC108500.1|FC108500
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|22059429|gb|BQ813422.1|BQ813422
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|22070985|gb|BQ820323.1|BQ820323
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAAC
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAAC
EST: gi|161798774|gb|FC082943.1|FC082943
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|22075489|gb|BQ824265.1|BQ824265
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161798389|gb|FC084365.1|FC084365
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161818971|gb|FC108839.1|FC108839
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161792539|gb|FC081793.1|FC081793
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|7709648|gb|AW773019.1|AW773019
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGAACA-C
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGA-CAAC
EST: gi|22056448|gb|BQ812337.1|BQ812337
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|10768099|gb|AV618924.1|AV618924
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161812105|gb|FC098284.1|FC098284
EST:     GACTTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCCAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161817510|gb|FC104154.1|FC104154
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161798590|gb|FC084033.1|FC084033
EST:     CGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: CGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|22076609|gb|BQ825401.1|BQ825401
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|49461383|gb|BP089296.1|BP089296
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCA
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCA
EST: gi|22066253|gb|BQ816845.1|BQ816845
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161808681|gb|FC096778.1|FC096778
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACCACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|22071254|gb|BQ820592.1|BQ820592
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161809509|gb|FC096540.1|FC096540
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|15694485|gb|BI718790.1|BI718790
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161815234|gb|FC101531.1|FC101531
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACCACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|49460075|gb|BP087988.1|BP087988
EST:     GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161820432|gb|FC106972.1|FC106972
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161812106|gb|FC098285.1|FC098285
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161798589|gb|FC084032.1|FC084032
EST:     CGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: CGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
EST: gi|161796559|gb|FC082382.1|FC082382
EST:     GACCTCCGGCGCGTGGCCAAGGAGCTGGGCGAGAACCTGACTG                         AGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG
genomic: GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggc ... ctgtacgcagAGGAGGAGCTCCAAGAGATGATTGCGGAGGCGGACCGCAACGACGACAACG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GACCTCCGGCGTGTGGCCAAGGAGCTGGGCGAGAACCTGACTGgtgagtaggctggccggggatcgagcgtgaaagcaaccttacaagatgggacagcccgcggaggcgccgtctccggccccaaggatgtgcagacttcgtactggtgcaccgcctgacgtgtccacacgctctggctgtacgcag

- - - - - - - - - AAGGAG
- - - - - - - - - - GGAGCT