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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgcctcttgggcttcatgtgttccaattgttgactgtaacattgaccgcgagttatcgcgcgctcacccgcgcgtcttccctttccttgcttg...

Basic information

species Chlamydomonas reinhardtii
transcript EDO98562
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161794603|gb|FC081985.1|FC081985
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|22056449|gb|BQ812338.1|BQ812338
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161820089|gb|FC105810.1|FC105810
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|22055142|gb|BQ811690.1|BQ811690
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|22055465|gb|BQ811836.1|BQ811836
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|10126718|gb|BE725294.1|BE725294
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|22059430|gb|BQ813423.1|BQ813423
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|10781297|gb|AV637977.1|AV637977
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161801415|gb|FC091213.1|FC091213
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|6545633|gb|AV391417.1|AV391417
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|10773251|gb|AV624074.1|AV624074
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161821609|gb|FC108734.1|FC108734
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161792540|gb|FC081794.1|FC081794
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|10788791|gb|AV626511.1|AV626511
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|49464181|gb|BP092094.1|BP092094
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161804143|gb|FC092176.1|FC092176
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161811366|gb|FC097974.1|FC097974
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161791783|gb|FC078353.1|FC078353
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|10191305|gb|BE761381.1|BE761381
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|9210661|gb|BE337576.1|BE337576
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|10779525|gb|AV636205.1|AV636205
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161823500|gb|FC108500.1|FC108500
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|22070985|gb|BQ820323.1|BQ820323
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|22075489|gb|BQ824265.1|BQ824265
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161798389|gb|FC084365.1|FC084365
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|34992904|gb|CF566821.1|CF566821
EST:     GCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: GCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161818971|gb|FC108839.1|FC108839
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|7709648|gb|AW773019.1|AW773019
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|10768099|gb|AV618924.1|AV618924
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161817510|gb|FC104154.1|FC104154
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|49462682|gb|BP090595.1|BP090595
EST:     GCTGAAGGTGGCCATGCGTGCTCTGGCGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTC
genomic: GCTGAAGGTGGCCATGCGTGCTCTGG-GCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTC
EST: gi|22076609|gb|BQ825401.1|BQ825401
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|49461383|gb|BP089296.1|BP089296
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|22066253|gb|BQ816845.1|BQ816845
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161808681|gb|FC096778.1|FC096778
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|22071254|gb|BQ820592.1|BQ820592
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161809509|gb|FC096540.1|FC096540
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|15694485|gb|BI718790.1|BI718790
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|9441327|gb|BE441690.1|BE441690
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161815234|gb|FC101531.1|FC101531
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161820432|gb|FC106972.1|FC106972
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|22074117|gb|BQ823306.1|BQ823306
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGTTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
EST: gi|161796559|gb|FC082382.1|FC082382
EST:     AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAG                         ATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC
genomic: AGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgc ... aaaccctcagATCAAGAAGATGATCTCGGAGATTGACAAGGACGGCTCGGGCACCATCGAC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GAGCTGAAGGTGGCCATGCGTGCTCTGGGCTTCGAGCCGAAGAAGGAGGAGgtgagaccgcctcttgggcttcatgtgttccaattgttgactgtaacattgaccgcgagttatcgcgcgctcacccgcgcgtcttccctttccttgcttg

 AGCTGA
-  CTGAAG
- - - - - - - - - - - - - - - - - -  CGAAGA
- - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - -  GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgggctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -catgtgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgactgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gcgtctt