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GACAAACACATTAGGGGCGTATTTGATCACACCGGCAACGGGTTCCCATTTTGTCATGTACTTGGCGAAAATGAAAGgtatgaaaccaatctcttctcacaagtaatgaacgtcaagttcttgggattattttcttctatctttcgataatagagtcaatcttttaggaactacctt...
species | Arabidopsis thaliana |
transcript | AT4G17050.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CACACCGGCAACGGGTTCCCATTTTGTCATGTACTTGGCGAAAATGAAAG AAATGTCAAGTTCAGEST: gi|125315506|gb|EL329591.1|EL329591
genomic: CACACCGGCAACGGGTTCCCATTTTGTCATGTACTTGGCGAAAATGAAAGgtatgaaacc ... tctcttgcagAAATGTCAAGTTCAG
EST: GGGTTCCCATTTTGTCATGTACTTGGCGAAAATGAAAG AAATGCCAAGTTCAGGTTTGCCTCCACAAGACATAGAGCGEST: gi|19878038|gb|AU238869.1|AU238869
genomic: GGGTTCCCATTTTGTCATGTACTTGGCGAAAATGAAAGgtatgaaacc ... tctcttgcagAAATGTCAAGTTCAGGTTTGCCTCCACAAGACATAGAGCG
EST: CACACCGGCAACGGGTTCCCATTTTGTCATGTACTTGGCGAAAATGAAAG AAATGTCAAGTTCAGGTTTGCCTCCACAAGACATAGAGCG
genomic: CACACCGGCAACGGGTTCCCATTTTGTCATGTACTTGGCGAAAATGAAAGgtatgaaacc ... tctcttgcagAAATGTCAAGTTCAGGTTTGCCTCCACAAGACATAGAGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACAAACACATTAGGGGCGTATTTGATCACACCGGCAACGGGTTCCCATTTTGTCATGTACTTGGCGAAAATGAAAGgtatgaaaccaatctcttctcacaagtaatgaacgtcaagttcttgggattattttcttctatctttcgataatagagtcaatcttttaggaactacctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaccaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctcttctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -acaagtaa