1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaatctctgttcctagattttgttgttttgagaaattcaaagttcattgtaaaggactctcaaaacgtttaatgcatttggaaggaagcatgttaagggtcctgattttccttatcctcatattgtagGAAGCATGTTGTATTTGGCAAAGTCGTTGAAGGGATGGCAGTAATCAAGAAAATGGAACTTGTGGGGACGAGTGATGGGAAACCTACTAGCCCAGTCAAA
species | Arabidopsis thaliana |
transcript | AT3G63400.3 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: AAC-GGTCCCAATTTTTTATACTTTTTAAACGCCAACCACATCTTGATGG GAAGCATGTTGTATTTGGCAAAGTCGTTGAAGGGATGGEST: gi|86073052|gb|DR368809.1|DR368809
genomic: AACGGGTCCCAATTTTTTATACTTTTTAAACGCCAACCACATCTTGATGGgtaatctctg ... catattgtagGAAGCATGTTGTATTTGGCAAAGTCGTTGAAGGGATGG
EST: AACGGGTCCCAATTTTTTATACTTTTTAAACGCCAACCACATCTTGATGG GAAGCATGTTGTATTTGGCAAAGTCGTTGAAGGGATGGCAGTAATCAAGAA
genomic: AACGGGTCCCAATTTTTTATACTTTTTAAACGCCAACCACATCTTGATGGgtaatctctg ... catattgtagGAAGCATGTTGTATTTGGCAAAGTCGTTGAAGGGATGGCAGTAATCAAGAA
gcatttggaaggaagcatgttaagggtcctgattttccttatcctcatattgtagGAAGCATGTTGTATTTGGCAAAGTCGTTGAAGGGATGGCAGTAATCAAGAAAATGGAACTTGTGGGGACGAGTGATGGGAAACCTACTAGCCCAGTCAAA
tcctgat putative branch site (score: 3)
ttttccttatcctcat CT-rich tract
atattgta TA-rich tract