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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGGTGATTTTTCCAATGGGAATGgtattcttcaaacctgttatcctttatacattaaatctccaaaccgtatatatttctttatatcacaatatgtgtgatgtagatacctcatgatctagtt...

Basic information

species Arabidopsis thaliana
transcript AT3G63400.3
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|125265560|gb|EL279645.1|EL279645
EST:     TGGTGATTTTTCCAATGGGAATG                         GCACTGGTGGGGAGAGCATCTATGGTGGGAAGTTTTCAG
genomic: TGGTGATTTTTCCAATGGGAATGgtattcttca ... tgatttgcagGCACTGGTGGGGAGAGCATCTATGGTGGGAAGTTTTCAG
EST: gi|86073052|gb|DR368809.1|DR368809
EST:     GGTGGTGATTTTTCCAATGGGAATG                         GCACTGGTGGGGAGAGCATCTATGGTGGGAAGTTTTCAG
genomic: GGTGGTGATTTTTCCAATGGGAATGgtattcttca ... tgatttgcagGCACTGGTGGGGAGAGCATCTATGGTGGGAAGTTTTCAG