1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtacgccactgtgcctgttatacataactgtattttgctattacctgatcgtgtcttgtgatgacccctctttgaattttgcagACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATGCAAAGGGCTGAACTTTGGACTGCCTCACCTTTTCTGACTAGTGAATGGGTGATATGT
species | Zea mays |
transcript | GRMZM2G052688_T01 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AAGTTGCCTTGTGAGAGATTAAAGCCAAAAAAGAAGGCCAAGCTGCAGCA ACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATGCAAAGGGCEST: gi|211129938|gb|FL016638.1|FL016638
genomic: AAGTTGCCTTGTGAGAGATTAAAGCCAAAAAAGAAGGCCAAGCTGCAGCAgtacgccact ... aattttgcagACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATGCAAAGGGC
EST: AAGTTGCCTTGTGAGAGATTAAAGCCAAAAAAGAAGGCCAAGCTGCAGCA ACCATCTTCCGACATTGATGGTCCGAATTCACCCTCTCCAATGCAAAGGGCEST: gi|91051894|gb|EB162312.1|EB162312
genomic: AAGTTGCCTTGTGAGAGATTAAAGCCAAAAAAGAAGGCCAAGCTGCAGCAgtacgccact ... aattttgcagACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATGCAAAGGGC
EST: AAGTTGCCTTGTGAGAGATTAAAGCCAAAAAAGAAGGCCAAGCTGCAGCA ACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATGCAAAGGGCEST: gi|88755916|gb|DY540057.1|DY540057
genomic: AAGTTGCCTTGTGAGAGATTAAAGCCAAAAAAGAAGGCCAAGCTGCAGCAgtacgccact ... aattttgcagACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATGCAAAGGGC
EST: AAGTTGCCTTGTGAGAGATTAAAGCCAAAAAAGAAGGCCAAGCTGCAGCA ACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATGCAAAGGGC
genomic: AAGTTGCCTTGTGAGAGATTAAAGCCAAAAAAGAAGGCCAAGCTGCAGCAgtacgccact ... aattttgcagACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATGCAAAGGGC
gtattttgctattacctgatcgtgtcttgtgatgacccctctttgaattttgcagACCATCTTCCGACATTGATGGTCCGATTTCACCCTCTCCGATGCAAAGGGCTGAACTTTGGACTGCCTCACCTTTTCTGACTAGTGAATGGGTGATATGT
acctgat putative branch site (score: 17)
tttgaatttt TA-rich tract