1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ATCTGTTTCTTCTAAGATTCTTACGGAAGTTGCAAAGTGGATGGAGCGCTTTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTGgttagtttgctgttttaaagaatataatatgtacctcagtcctattgattgttattggttgcttccagcacagcaatttagatatactcccgcgggttct...
species | Zea mays |
transcript | GRMZM5G840928_T02 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTG GAATGTGTGAGTAATATCATGAGGCACGCACGACAGGCTAATATTCCAACTEST: gi|101395549|gb|EB819702.1|EB819702
genomic: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTGgttagtttgc ... ttatttgtagGAATGTGTGAGTAATATCATGAGGCACGCACGACAGGCTAATATTCCAACT
EST: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTG GAATGTGTGAGTAATATCCTGAGGCACGCACGACAGGCTAATATTCCAACTEST: gi|50323072|gb|CO518198.1|CO518198
genomic: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTGgttagtttgc ... ttatttgtagGAATGTGTGAGTAATATCATGAGGCACGCACGACAGGCTAATATTCCAACT
EST: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTG GAATGTGTGAGTAATATCATGAGGCACGCACGACAGGCTAATATTCCAACTEST: gi|211190743|gb|FL216452.1|FL216452
genomic: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTGgttagtttgc ... ttatttgtagGAATGTGTGAGTAATATCATGAGGCACGCACGACAGGCTAATATTCCAACT
EST: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCC-TTTCTTTTG GAATGTGTGAGEST: gi|76912720|gb|DV164861.1|DV164861
genomic: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTGgttagtttgc ... ttatttgtagGAATGTGTGAG
EST: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTG GAATGTGTGAGTAATATCATGAGGCACGCACGACAGGCTAATATTCCAACT
genomic: TTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTGgttagtttgc ... ttatttgtagGAATGTGTGAGTAATATCATGAGGCACGCACGACAGGCTAATATTCCAACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCTGTTTCTTCTAAGATTCTTACGGAAGTTGCAAAGTGGATGGAGCGCTTTGATTGCATTGTTGTTGGTCCTGGCCTTGGAAGGGACCCCTTTCTTCTGgttagtttgctgttttaaagaatataatatgtacctcagtcctattgattgttattggttgcttccagcacagcaatttagatatactcccgcgggttct
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