1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtttttatcctaaaatcttattgctctactacattttttgtgatatagttgtatttcgtatgaaattgctgacttattatttttaacttgtatgtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAACAGCAACTATCGGA
species | Zea mays |
transcript | GRMZM2G164562_T01 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|211540751|gb|FL105309.1|FL105309
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|60357187|gb|DN224160.1|DN224160
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|78089033|gb|DV517426.1|DV517426
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|32862616|gb|CF002298.1|CF002298
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|7216715|gb|AW562837.1|AW562837
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|40335508|gb|CK369578.1|CK369578
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|213172541|gb|FM189510.1|FM189510
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|32808278|gb|CD960512.1|CD960512
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCCTTTAEST: gi|211540748|gb|FL105306.1|FL105306
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|113701263|gb|EE678767.1|EE678767
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|32808708|gb|CD960942.1|CD960942
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCCTTTAEST: gi|32834558|gb|CD974236.1|CD974236
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|211229044|gb|FL456611.1|FL456611
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|32944234|gb|CF049053.1|CF049053
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|60337133|gb|DN204106.1|DN204106
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|18659504|gb|BM500373.1|BM500373
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCCAAAGTGGCTTTTAAGCCEST: gi|5650286|gb|AI920646.1|AI920646
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTC-AAAGTGGCTTTTAAGCC
EST: ATGAGGCTGGAAATGTGAGGACCCGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|148963944|gb|EE015066.2|EE015066
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|37385128|gb|CF629683.1|CF629683
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|45568545|gb|CK986116.1|CK986116
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: GTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGC-TTTATGCCAEST: gi|211540749|gb|FL105307.1|FL105307
genomic: GTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|60352524|gb|DN219497.1|DN219497
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|211086351|gb|FL105311.1|FL105311
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|67042195|gb|CO468450.1|CO468450
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|32793479|gb|CD945715.1|CD945715
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGCAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTEST: gi|5901142|gb|AW042242.1|AW042242
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTT
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAEST: gi|116822041|gb|EC865407.1|EC865407
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
EST: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCGG GGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
genomic: ATGAGGCTGGAAATGTGAGGACACGAACTAATCGCTCAGGCGGTGTTCAGgtttttatcc ... gtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCA
ttgtatttcgtatgaaattgctgacttattatttttaacttgtatgtgcatgcagGGAGGGATATCAAATGGTGAAATTATTTACTTCAAAGTGGCTTTTAAGCCAACAGCAACTATCGGA
ttttaac putative branch site (score: 504)
acttattatttttaac TA-rich tract