1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtagtttacaagttttctatttgtctaagttttagcatattgtttctgaaacttcagcacaaaaaaacatctatggttgcccagaaccttgattgcttatttgctaaatttatattttaatatgcttactataagtatctctgcacgtgcagGTTGTGAACAGGATCCAAAAATTACGGAAGACTGCTCAGCTTGAACCTGCTGATCCAGTTGATGTGTATTACGAATCTGTGGGCAGTGACAAAAACACAC
species | Zea mays |
transcript | GRMZM2G158627_T01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TAGATCTACGAGCTGACCAGTCATTGTTTGAAGCTGGAGTGGCTCGAGAG GTTGTGAACAGGATCCAAAAATTACGGAAGACTGCTCAGCTTGAACCTGCTEST: gi|78022271|gb|DV490658.1|DV490658
genomic: TAGATCTACGAGCTGACCAGTCATTGTTTGAAGCTGGAGTGGCTCGAGAGgtagtttaca ... gcacgtgcagGTTGTGAACAGGATCCAAAAATTACGGAAGACTGCTCAGCTTGAACCTGCT
EST: CGAGCTGACCAGTCATT-TTTGAAGCTGGAGTGGCTCGAGAG GTTGTGAACACGATCCAAAAATTACGGAAGACTGCTCAGCTTGAACCTGCT
genomic: CGAGCTGACCAGTCATTGTTTGAAGCTGGAGTGGCTCGAGAGgtagtttaca ... gcacgtgcagGTTGTGAACAGGATCCAAAAATTACGGAAGACTGCTCAGCTTGAACCTGCT
tatttgctaaatttatattttaatatgcttactataagtatctctgcacgtgcagGTTGTGAACAGGATCCAAAAATTACGGAAGACTGCTCAGCTTGAACCTGCTGATCCAGTTGATGTGTATTACGAATCTGTGGGCAGTGACAAAAACACAC
tgcttac putative branch site (score: 2)
tctctgc putative PPT
taaatttatattttaa TA-rich tract