Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGCGGAGCGAGGTCGACGAGAGCACCCTCACCGGGGAGTCCTTCCCGGTCGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATGgtatataaatatatatatcacacaacagcactccgccgtatcatgcgtgttagttgcagctttctgatcctgtcgtgattctgtgtggcag

Basic information

species Zea mays
transcript GRMZM2G099191_T02
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|149103749|gb|EE289155.2|EE289155
EST:     CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATG                         GCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
genomic: CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATGgtatataaat ... tgtgtggcagGCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
EST: gi|148934257|gb|EC878279.2|EC878279
EST:     CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATG                         GCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
genomic: CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATGgtatataaat ... tgtgtggcagGCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
EST: gi|149070628|gb|EE159039.2|EE159039
EST:     CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATG                         GCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
genomic: CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATGgtatataaat ... tgtgtggcagGCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
EST: gi|148934258|gb|EC878280.2|EC878280
EST:     CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATG                         GCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
genomic: CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATGgtatataaat ... tgtgtggcagGCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
EST: gi|149079488|gb|EE168465.2|EE168465
EST:     CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATG                         GCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
genomic: CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATGgtatataaat ... tgtgtggcagGCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
EST: gi|149004834|gb|EE039339.2|EE039339
EST:     CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATG                         GCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA
genomic: CGCCAAGCAGCCGGAGTCCCAGGTCTGGGCCGGCACGCTCAACATCGATGgtatataaat ... tgtgtggcagGCTACATCGCTGTCAGGACAACTGCCATGGCGGACAACTCTGCCGTCGCTA