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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGTTCATGGGAGTGCATTGGGTGCTAAAGAAGTAGATGCAACAAGGAAGAACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaattgagaaggttgcttttgcttcatgtttcaaattaagtttgaatcctttagtgagcttcttgtgtttcacag

Basic information

species Vitis vinifera
transcript Vv16s0022g01440.t01
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv16s0022g01440.t01 (Vitis vinifera), 5'ss of exon 5
lower sequence: GLYMA10G43990.1 (Glycine max), 5'ss of exon 5
GTGTTCATGGGAGTGCATTGGGTGCTAAAGAAGTAGATGCAACAAGGAAGAACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaattgag--aaggttgcttttgcttcatgtt--tcaaattaagtttgaatcctttag--tgag---cttcttgtgtttcacag
||||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| |||||  ||||||| ||||| |||||||| |||||||| |||||| ||    |||  |  | |   |||| ||| | ||  ||   | |  |||  ||  | |||  |||     |  || | || |  ||
GTGTTCATGGGAGTGCATTAGGTGCTAAAGAAGTGGATGCTACAAGGAAGAATCTTGGATGGCCATACGAGCCTTTCCATGTGCCAGAAGATGTCAAGAAgtat-gatggggagttagagatatctttgtttcctcttagtctgctgagattttcatgatctagaatgaaactttctttattttccttag

upper sequence: Vv16s0022g01440.t01 (Vitis vinifera), 5'ss of exon 5
lower sequence: GLYMA03G03200.1 (Glycine max), 5'ss of exon 5
GTGTTCATGGGAGTGCATTGGGTGCTAAAGAAGTAGATGCAACAAGGAAGAACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaattgag----aaggttgcttttgcttcatgtttcaaattaagtttg----aatccttta-gtgagcttcttgtgt-ttcacag
|||| ||||| |||||| ||||||| |||||||| ||||| || ||| |||||||||| ||| | || ||||||||||||||||| |||||||||||||||||| ||   || |     || || |||||      ||   |   | | ||||      || ||  |   ||  | ||||| | | | |||
GTGTGCATGGAAGTGCACTGGGTGCCAAAGAAGTTGATGCCACCAGGCAGAACCTTGGATGGTCACATGAGCCATTCCACGTGCCTGAGGATGTCAAAAAgtatggatgatgggtttagagatttcttttttcctgtgacactgctgaggtttataatgatactgaataagaattgcttgtctgtccccag

upper sequence: Vv16s0022g01440.t01 (Vitis vinifera), 5'ss of exon 5
lower sequence: GLYMA20G38720.1 (Glycine max), 5'ss of exon 5
GTGTTCATGGGAGTGCATTGGGTGCTAAAGAAGTAGATGCAACAAGGAAGAACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaattgag--aaggttgcttttgcttcatgtt--tcaaattaagtttgaat--cctttagtg-agcttcttgtgtttcacag---
|||||||||| |||||||| ||| |||||||||| ||||| ||||||||||| ||||| |||||  ||||||| ||||| |||||||| ||||| ||||||||| ||    |||  |  | |   | || ||| | ||  ||   | |  |||  ||   ||| | || | |||  | |  ||  |     
GTGTTCATGGAAGTGCATTAGGTACTAAAGAAGTGGATGCTACAAGGAAGAATCTTGGATGGCCATACGAGCCTTTCCATGTGCCAGAAGATGTTAAAAAgtatggatggggagttagagatatctgtgtttcctcttagtctgctgagattttcatgatcttgaatgtaactttctttacttttccctag

upper sequence: Vv16s0022g01440.t01 (Vitis vinifera), 5'ss of exon 5
lower sequence: GLYMA19G29950.1 (Glycine max), 5'ss of exon 1
GTGTTCATGGGAGTGCATTGGGTGCTAAAGAAGTAGATGCAACAAGGAAGAACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaattgagaaggttgcttttgcttcatgtttcaaattaagtttgaatcctttagtgagcttcttgtgtttcacag
  |||  |        ||    |   |   | |||    | ||           || |||  |||  | || |     |  | | | ||  |   |  ||||     |  ||  || |  |    |||| || |    ||    || | || | |   ||  |  | | ||||||| |   
--GTTATTAAACACAAATCCACTTTGATCAAGGTAACCACTACCGTTGGA---TTTAGTTCCCCTAGCAAGGC----TAACTCCTATAGTGTTCAAGCAAGTGCATTAGgtgctaaagaagtggatgctacaaggaagaatcctagat-gactacacgagcca-ttccatgtgtttgaag-

upper sequence: Vv16s0022g01440.t01 (Vitis vinifera), 5'ss of exon 5
lower sequence: GLYMA01G29600.1 (Glycine max), 5'ss of exon 3
GTGTTCATGGGAGTGCATTGGGTGCTAAAGAAGTAGATGCAACAAGGAAGAACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaattgag--aaggttgcttttgcttcatgtt--tcaaattaagtttgaatcctttagtg---agcttcttgtgtttcacag---
                                 | ||||| ||||||||||| ||||| | |||  ||||||| ||||| |||||||| |||||||| |||||| ||    |||  |  | |   |||| ||| | ||  ||   | |  |||  ||  | ||      | |||  | | |||  |     
---------------------------------TGGATGCTACAAGGAAGAATCTTGGATAGCCATACGAGCCTTTCCATGTGCCAGAAGATGTCAAGAAGTATGGATGGGGAgttagagatatctttgtttcctcttactctgctgagattttcatgatctaaaatgaaactttctttatttttccttag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110698694|gb|EE076488.1|EE076488
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|77581088|gb|DV219469.1|DV219469
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351041306|gb|FQ447433.1|FQ447433
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|32250162|gb|CD715981.1|CD715981
EST:     GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|110718593|gb|EE095602.1|EE095602
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|27581665|gb|CB004360.1|CB004360
EST:     GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|77584013|gb|DV221048.1|DV221048
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|71866546|gb|DT015601.1|DT015601
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351027912|gb|FQ425813.1|FQ425813
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|110698259|gb|EE075601.1|EE075601
EST:     ACCTT-GTTCCGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: ACCTTGGTT-GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351019574|gb|FQ439391.1|FQ439391
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351028127|gb|FQ426028.1|FQ426028
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351033600|gb|FQ447759.1|FQ447759
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351025444|gb|FQ435136.1|FQ435136
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|110699426|gb|EE076412.1|EE076412
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|46917933|gb|CN547262.1|CN547262
EST:     GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351033112|gb|FQ446465.1|FQ446465
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|77588405|gb|DV223409.1|DV223409
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|71858646|gb|DT007701.1|DT007701
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|77585235|gb|DV221707.1|DV221707
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|349828296|gb|FQ416249.1|FQ416249
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351031273|gb|FQ445298.1|FQ445298
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|32250360|gb|CD716179.1|CD716179
EST:     GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|349827934|gb|FQ422802.1|FQ422802
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|110687936|gb|EE065912.1|EE065912
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351017442|gb|FQ435795.1|FQ435795
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351017776|gb|FQ436129.1|FQ436129
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|32250316|gb|CD716135.1|CD716135
EST:     GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: GGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351040605|gb|FQ438149.1|FQ438149
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|351027164|gb|FQ440031.1|FQ440031
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCATGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|30255737|gb|CB971869.1|CB971869
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
EST: gi|33406481|gb|CF212108.1|CF212108
EST:     AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAA                         GCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA
genomic: AACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaat ... tgtttcacagGCACTGGAGCCGCCACATCCCTGATGGAGCTGCCCTTGAAGCTGAATGGAA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTGTTCATGGGAGTGCATTGGGTGCTAAAGAAGTAGATGCAACAAGGAAGAACCTTGGTTGGCCTCACGAGCCATTCCACGTGCCAGAGGATGTCAAAAAgtattgaaattgagaaggttgcttttgcttcatgtttcaaattaagtttgaatcctttagtgagcttcttgtgtttcacag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG