1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TCTCAAGCTCGCGCCGGATGCTGTCGTCGTTGGGTCCAAAGTTTGCATACAGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAGgtttgtatcaaacttcgtcttcgctttgcttttgtttttctatctctttttgtacaagagtgtgtttttgtccgtgatttctttgtgctttttctattgactgcaggaactgtatgatcgcag
species | Selaginella moellendorffii |
transcript | EFJ07706 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAG GGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATGEST: gi|169061130|gb|FE470136.1|FE470136
genomic: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAGgtttgtatca ... atgatcgcagGGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATG
EST: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAG GGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATGEST: gi|169113901|gb|FE515956.1|FE515956
genomic: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAGgtttgtatca ... atgatcgcagGGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATG
EST: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAG GGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATGEST: gi|169044935|gb|FE450857.1|FE450857
genomic: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAGgtttgtatca ... atgatcgcagGGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATG
EST: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAG GGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATGEST: gi|169030942|gb|FE436845.1|FE436845
genomic: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAGgtttgtatca ... atgatcgcagGGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATG
EST: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAG GGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATGEST: gi|169036581|gb|FE444139.1|FE444139
genomic: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAGgtttgtatca ... atgatcgcagGGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATG
EST: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAG GGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATGEST: gi|169059368|gb|FE467510.1|FE467510
genomic: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAGgtttgtatca ... atgatcgcagGGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATG
EST: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAG GGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATG
genomic: AGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAGgtttgtatca ... atgatcgcagGGAGGGGAGAAGCTCGATCTGGGAAAAGGTCATGTCTTGGAGTTTGTGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCTCAAGCTCGCGCCGGATGCTGTCGTCGTTGGGTCCAAAGTTTGCATACAGTTCTTGCAGAACCTTGTTCTCACCCCGTTCAAGAGCATGGTCGTAAAGgtttgtatcaaacttcgtcttcgctttgcttttgtttttctatctctttttgtacaagagtgtgtttttgtccgtgatttctttgtgctttttctattgactgcaggaactgtatgatcgcag
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