1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...tgcacctttaccattttccttataactatcacatagctgcgaggaattgtaatagtgatcgttgattgaaaactgagtcttgtgccttcttcgtgagcagGAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCAACGGCTTCGGCCGCTTCGGTCGTTTGGTTGCTAGAGTCGCTCTAGAGAG
species | Physcomitrella patens |
transcript | PP1S9_47V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TCGTTTTTGGCGACAAGGTGGATCAATCAAGTCACGAAAGATGGGAAGAG GAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCAEST: gi|100441025|gb|BY962513.1|BY962513
genomic: TCGTTTTTGGCGACAAGGTGGATCAATCAAGTCACGAAAGATGGGAAGAGgtattgctcc ... tcgtgagcagGAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCA
EST: TCGTTTTTGGCGACAAGGTGGATCAATCAAGTCACGAAAGATGGGAAGAG GAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCAEST: gi|67571426|gb|BJ944250.1|BJ944250
genomic: TCGTTTTTGGCGACAAGGTGGATCAATCAAGTCACGAAAGATGGGAAGAGgtattgctcc ... tcgtgagcagGAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCA
EST: TCGTTTTTGGCGACAAGGTGGATCAATCAAGTCACGAAAGATGGGAAGAG GAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCAEST: gi|100409561|gb|BY955993.1|BY955993
genomic: TCGTTTTTGGCGACAAGGTGGATCAATCAAGTCACGAAAGATGGGAAGAGgtattgctcc ... tcgtgagcagGAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCA
EST: TCGTTTTTGGCGACAAGGTGGATCAATCAAGTCACGAAAGATGGGAAGAG GAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCA
genomic: TCGTTTTTGGCGACAAGGTGGATCAATCAAGTCACGAAAGATGGGAAGAGgtattgctcc ... tcgtgagcagGAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCA
attgtaatagtgatcgttgattgaaaactgagtcttgtgccttcttcgtgagcagGAACAAAGACTCCACCAGCCTCTCCAAAGGAGAAGCTTCGAATCGGTATCAACGGCTTCGGCCGCTTCGGTCGTTTGGTTGCTAGAGTCGCTCTAGAGAG
cgttgat putative branch site (score: 18)
tcttgtgccttcttc putative PPT
attgaaaa TA-rich tract