1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtacggtttgaatttgtatgaatatcggagacttttgtcaatcaggaaattcgatgtatgatttttattcatgatgattgatgagataattcataatttagaataagctctctgccctcatgaagagagtagttcttatgtcagcaataatgtggctactaacaaatcggttttgcttgtacttgcagTTGTCACGATTGGGGCAGTACTATTTGCGTTCCAGCAATTTGCTGGCATAAACGCCATTTTCTATTTCTCATCAGCAGTTTTCAAAAGTGCTGGTATTAC
species | Physcomitrella patens |
transcript | PP1S99_154V6.1 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: CAAGGGTGGTTCATCTTGGAAGGCTTTGCTTGATCCACGGTATATCAGAG TTGTCACGATTGGGGCAGTACTATTTGCGTTCCAGCAATTTGCTGGCATAA
genomic: CAAGGGTGGTTCATCTTGGAAGGCTTTGCTTGATCCACGGTATATCAGAGgtacggtttg ... gtacttgcagTTGTCACGATTGGGGCAGTACTATTTGCGTTCCAGCAATTTGCTGGCATAA
tcttatgtcagcaataatgtggctactaacaaatcggttttgcttgtacttgcagTTGTCACGATTGGGGCAGTACTATTTGCGTTCCAGCAATTTGCTGGCATAAACGCCATTTTCTATTTCTCATCAGCAGTTTTCAAAAGTGCTGGTATTAC
tactaac putative branch site (score: 19)
aataatgt TA-rich tract