1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
gtgaacacctttgtggttgtaattgctgtttgcttagaagctgctggtgaaaactgttcatttcatttcggtggttgtaattaggcactacatgcatagcatgttgtttgtcgcttacctgtagataattaccctgaatttttttctttttgtgtaatgcctaattatgtgcagCATTAGTCCGAACATTCGAGAAGGGCTTCTAGAGGTGTTCTATGGAGTGTACGAAAAGGATCCTGACAAG
species | Physcomitrella patens |
transcript | PP1S83_45V6.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: GACGCCAACGGTGGGCGATTGATCTTTTACGATTTCGGGATGATGGGCAG CATTAGTCCGAACATTCGAGAAGGGCTTCTAGAGGTGTTCTATGGAGTGTAEST: gi|162150064|gb|FC326595.1|FC326595
genomic: GACGCCAACGGTGGGCGATTGATCTTTTACGATTTCGGGATGATGGGCAGgtgaacacct ... ttatgtgcagCATTAGTCCGAACATTCGAGAAGGGCTTCTAGAGGTGTTCTATGGAGTGTA
EST: CCAACGGTGGGCGATTGATCTTTTACGATTTCGGGATGATGGGCAG CATTAGTCCGAACATTCGAGAAGGGCTTCTAGAGGTGTTCTATGGAGTGTA
genomic: CCAACGGTGGGCGATTGATCTTTTACGATTTCGGGATGATGGGCAGgtgaacacct ... ttatgtgcagCATTAGTCCGAACATTCGAGAAGGGCTTCTAGAGGTGTTCTATGGAGTGTA
tgtagataattaccctgaatttttttctttttgtgtaatgcctaattatgtgcagCATTAGTCCGAACATTCGAGAAGGGCTTCTAGAGGTGTTCTATGGAGTGTACGAAAAGGATCCTGACAAG
gcctaat putative branch site (score: 61)
aatttttttctttttg TA-rich tract